RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C8orf74Q6P047 294 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 C6orf15Q6UXA7 325 aaPredicted RBP16.72■□□□□ 0.27
USP39-208ENST00000455732 CDHR3Q6ZTQ4 885 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 ZNF605Q86T29 641 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 SLC26A11Q86WA9 606 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 EXD3Q8N9H8 876 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 GALNT6Q8NCL4 622 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 ASB11Q8WXH4 323 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 KIAA1143Q96AT1 154 aaPredicted RBP16.72■□□□□ 0.27
USP39-208ENST00000455732 MED8Q96G25 268 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 EFHD1Q9BUP0 239 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 ZFATQ9P243 1243 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 CIDEBQ9UHD4 219 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 IL17BQ9UHF5 180 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 LNPEPQ9UIQ6 1025 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 FER1L5A0AVI2 2057 aa16.72■□□□□ 0.27
USP39-208ENST00000455732 SPTA1P02549 2419 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 PCM1Q15154 2024 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 ZNF891A8MT65 544 aaPredicted RBP16.71■□□□□ 0.27
USP39-208ENST00000455732 GFYI3L273 518 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 TERTO14746 1132 aaKnown RBP16.71■□□□□ 0.27
USP39-208ENST00000455732 CPNE3O75131 537 aaKnown RBP16.71■□□□□ 0.27
USP39-208ENST00000455732 F8A1P23610 371 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 PLTPP55058 493 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 ILF2Q12905 390 aaKnown RBP16.71■□□□□ 0.27
USP39-208ENST00000455732 ZIC1Q15915 447 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 TBR1Q16650 682 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 CYS1Q717R9 158 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 CPNE9Q8IYJ1 553 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 OR9A1PQ8NGU1 263 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 FBXO25Q8TCJ0 367 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 PYROXD1Q8WU10 500 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 ZNF592Q92610 1267 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 SAYSD1Q9NPB0 183 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 NSMCE4AQ9NXX6 385 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 TSR3Q9UJK0 312 aaKnown RBP16.71■□□□□ 0.27
USP39-208ENST00000455732 PCDHB3Q9Y5E6 796 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 KLK4Q9Y5K2 254 aa16.71■□□□□ 0.27
USP39-208ENST00000455732 TMEM150CB9EJG8 249 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 SCRG1O75711 98 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 ZIC2O95409 532 aaPredicted RBP16.7■□□□□ 0.26
USP39-208ENST00000455732 GSTA2P09210 222 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 FDXRP22570 491 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 HSD17B2P37059 387 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 GABRA4P48169 554 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 RGS4P49798 205 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 CDKN2DP55273 166 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 FAM45BPQ6NSW5 357 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 PIWIL4Q7Z3Z4 852 aaKnown RBP16.7■□□□□ 0.26
USP39-208ENST00000455732 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 MMGT1Q8N4V1 131 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 LMNTD1Q8N9Z9 388 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 MNS1Q8NEH6 495 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 OR1L3Q8NH93 324 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 FAM45AQ8TCE6 357 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 LRFN5Q96NI6 719 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 KLHL25Q9H0H3 589 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 FAM60AQ9NP50 221 aa16.7■□□□□ 0.26
USP39-208ENST00000455732 FLNBO75369 2602 aaKnown RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 ASH1LQ9NR48 2969 aaKnown RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 A0A1W2PPV9 198 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 KRT87PA6NCN2 255 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 ZNF839A8K0R7 811 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 H3BMH7 237 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 NKX2-8O15522 239 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 MAGP20916 626 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 MCM3P25205 808 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 OAS2P29728 719 aaKnown RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 ITGA1P56199 1179 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 SP140Q13342 867 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 TRADDQ15628 312 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 CRTC2Q53ET0 693 aaPredicted RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 HECTD2Q5U5R9 776 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 TAX1BP1Q86VP1 789 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 DNAJC22Q8N4W6 341 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 C2orf73Q8N5S3 287 aaPredicted RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 STARD8Q92502 1023 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 PKP4Q99569 1192 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 MCMBPQ9BTE3 642 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 INTS7Q9NVH2 962 aaKnown RBP16.69■□□□□ 0.26
USP39-208ENST00000455732 SERTAD3Q9UJW9 196 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 CROTQ9UKG9 612 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 VWA7Q9Y334 891 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 PSAT1Q9Y617 370 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 BSNQ9UPA5 3926 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
USP39-208ENST00000455732 ZBTB14O43829 449 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 SLC16A8O95907 504 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 NTRK1P04629 796 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 CCNYL3P0C7X3 344 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 DLSTP36957 453 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 SLC7A5Q01650 507 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 SF1Q15637 639 aaKnown RBP16.68■□□□□ 0.26
USP39-208ENST00000455732 PAQR3Q6TCH7 311 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 ZNF517Q6ZMY9 492 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms