RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 KLHL35Q6PF15 583 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 NUDCD3Q8IVD9 361 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 ADGRF3Q8IZF5 1079 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 EID2Q8N6I1 236 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-206ENST00000454852 EXT2Q93063 718 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 SLC22A18Q96BI1 424 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 TMEM237Q96Q45 408 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 MIPEPQ99797 713 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 GATA5Q9BWX5 397 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-206ENST00000454852 CAPS2Q9BXY5 557 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 SRMSQ9H3Y6 488 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 CCDC134Q9H6E4 229 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 CCDC177Q9NQR7 707 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-206ENST00000454852 INTS7Q9NVH2 962 aaKnown RBP10.89□□□□□ -0.67
TRAF4-206ENST00000454852 WWOXQ9NZC7 414 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 GPRC5BQ9NZH0 403 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 LRIT1Q9P2V4 623 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 EPHA6Q9UF33 1036 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 PCTPQ9UKL6 214 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 KLK4Q9Y5K2 254 aa10.89□□□□□ -0.67
TRAF4-206ENST00000454852 KRT87PA6NCN2 255 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 TMEM114B3SHH9 223 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 BTN3A3O00478 584 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 SIX3O95343 332 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-206ENST00000454852 SERPINE1P05121 402 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 GP1BAP07359 652 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-206ENST00000454852 NPPBP16860 134 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 ACP1P24666 158 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
TRAF4-206ENST00000454852 CAPZBP47756 277 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 AGTR2P50052 363 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 ABATP80404 500 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 NAE1Q13564 534 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PLCL1Q15111 1095 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 AASDHQ4L235 1098 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-206ENST00000454852 UNC50Q53HI1 259 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 FRMD7Q6ZUT3 714 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 ASCL5Q7RTU5 278 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 SYTL1Q8IYJ3 562 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 CARFQ8N187 725 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 LMNTD1Q8N9Z9 388 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 OR2A1Q8NGT9 310 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 FLVCR1-AS1Q8TAF5 88 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 CKAP2Q8WWK9 683 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PHF21BQ96EK2 531 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 WDR34Q96EX3 536 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 CNDP1Q96KN2 507 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 MAGEB18Q96M61 343 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 IL17FQ96PD4 163 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 OR4K3Q96R72 315 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 HAUS8Q9BT25 410 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 MECRQ9BV79 373 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PITPNM3Q9BZ71 974 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 DRC3Q9H069 523 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 ATG10Q9H0Y0 220 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 GSTO2Q9H4Y5 243 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 DNAJC11Q9NVH1 559 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 OGFRQ9NZT2 677 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 HAO1Q9UJM8 370 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PLAGL1Q9UM63 463 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 STK38LQ9Y2H1 464 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 ASB1Q9Y576 335 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 PCDHB11Q9Y5F2 797 aa10.88□□□□□ -0.67
TRAF4-206ENST00000454852 LAMA1P25391 3075 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 IGHV1OR21-1A0A087WYE8 117 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 UGDHO60701 494 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 SNNO75324 88 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 KATNA1O75449 491 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 UBXN7O94888 489 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 EPB42P16452 691 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 CKMT2P17540 419 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 EPORP19235 508 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 HRH2P25021 359 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 PEBP1P30086 187 aaKnown RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 MDH1P40925 334 aaKnown RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 CASP2P42575 452 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 HSPA7P48741 367 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 NAGLUP54802 743 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 RELAQ04206 551 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 PRDX1Q06830 199 aaKnown RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 CDC16Q13042 620 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 LCP2Q13094 533 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 BIRC2Q13490 618 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 FASTKQ14296 549 aaKnown RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 TBCCQ15814 346 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 SLC5A12Q1EHB4 618 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-206ENST00000454852 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 ATG16L1Q676U5 607 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 SPRED1Q7Z699 444 aa10.87□□□□□ -0.67
TRAF4-206ENST00000454852 THOC6Q86W42 341 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms