RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 KIAA1614Q5VZ46 1190 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 USP43Q70EL4 1123 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF382Q96SR6 550 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 ATG10Q9H0Y0 220 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 MMP27Q9H306 513 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 UGT2A1Q9Y4X1 527 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 STX16O14662 325 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 SNX4O95219 450 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 SPATS1Q496A3 300 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 CCDC117Q8IWD4 279 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 VPS35Q96QK1 796 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
UBE2D3-210ENST00000453744 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 H3BN98 237 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 MUSKO15146 869 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 DNAJA1P31689 397 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 IL12RB1P42701 662 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 RPL34P49207 117 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ZXDBP98169 803 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 PPP2R2BQ00005 443 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 LYSMD2Q8IV50 215 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 RIMKLAQ8IXN7 391 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF548Q8NEK5 533 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ENKURQ8TC29 256 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 GTF2H4Q92759 462 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 BTN2A3PQ96KV6 586 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TTPALQ9BTX7 342 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 GPR83Q9NYM4 423 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 NUDT4Q9NZJ9 180 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 DNMT3AQ9Y6K1 912 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 CLIC1O00299 241 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 SUV39H1O43463 412 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ENGP17813 658 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ITGALP20701 1170 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TGM1P22735 817 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 KRT20P35900 424 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 KCNQ1P51787 676 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 GRIK2Q13002 908 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC34A3Q8N130 599 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 METTL4Q8N3J2 472 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 PGBD5Q8N414 524 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 FBXO44Q9H4M3 255 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TBKBP1A7MCY6 615 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TNFRSF11BO00300 401 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TLL1O43897 1013 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 CPNE3O75131 537 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 NPPAP01160 153 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ITGB1P05556 798 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ALPIP09923 528 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 SPNP16150 400 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 OR1E2P47887 323 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 RACK1P63244 317 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 TBRG1Q3YBR2 411 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 CARD16Q5EG05 197 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 SCD5Q86SK9 330 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ASCC1Q8N9N2 400 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 OTULINQ96BN8 352 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 IL4I1Q96RQ9 567 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF225Q9UK10 706 aa13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-210ENST00000453744 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 CTDSP2O14595 271 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 AXIN1O15169 862 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 STK16O75716 305 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 ATXN1LP0C7T5 689 aaKnown RBP13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 RRM2P31350 389 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 HK3P52790 923 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 FCGRTP55899 365 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 FAM131AQ6UXB0 335 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 PAPD5Q8NDF8 572 aaKnown RBP13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 FKBP10Q96AY3 582 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 ARNT2Q9HBZ2 717 aa13.52□□□□□ -0.24
UBE2D3-210ENST00000453744 CCDC182A6NF36 153 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 UPK1AO00322 258 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 IFRD1O00458 451 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 BCKDHAP12694 445 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 FPR1P21462 350 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 LIPAP38571 399 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms