RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 THAP2Q9H0W7 228 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 MTHFD2LQ9H903 347 aaPredicted RBP1.7□□□□□ -2.14
LRCH3-209ENST00000452660 PREBQ9HCU5 417 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 SETD4Q9NVD3 440 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 P4HTMQ9NXG6 502 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 GTSE1Q9NYZ3 720 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.7□□□□□ -2.147e-8■■■□□ 18
LRCH3-209ENST00000452660 CAMTA1Q9Y6Y1 1673 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 LRRC7Q96NW7 1537 aa1.7□□□□□ -2.14
LRCH3-209ENST00000452660 LRP5O75197 1615 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 RALGAPA1Q6GYQ0 2036 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 NUP160Q12769 1436 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 A0A087WUV0 522 aaPredicted RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 LIPT2A6NK58 231 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 C2orf81A6NN90 581 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 SRRM4A7MD48 611 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CDRT15L2A8MXV6 281 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 TOM1O60784 492 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 HSPA1AP0DMV8 641 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 HSPA1BP0DMV9 641 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 GP1BBP13224 206 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 LMAN1P49257 510 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CAMPP49913 170 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 RPS3AP61247 264 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 IRX4P78413 519 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 TAB1Q15750 504 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 ASTE1Q2TB18 679 aaPredicted RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 MS4A18Q3C1V0 323 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 INTS11Q5TA45 600 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 LCN1P1Q5VSP4 162 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CCBE1Q6UXH8 406 aaPredicted RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 R3HCC1LQ7Z5L2 792 aaKnown RBP1.69□□□□□ -2.14
LRCH3-209ENST00000452660 FAM131BQ86XD5 332 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CATSPERDQ86XM0 798 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 ZBED8Q8IZ13 594 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 SLC34A3Q8N130 599 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 AQP11Q8NBQ7 271 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 RFFLQ8WZ73 363 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 PERPQ96FX8 193 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 WDFY2Q96P53 400 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 NEK1Q96PY6 1258 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 MAP3K3Q99759 626 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 NUP85Q9BW27 656 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 SLITRK2Q9H156 845 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 DNAJC18Q9H819 358 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 TRPV4Q9HBA0 871 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 B3GAT2Q9NPZ5 323 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CACNG4Q9UBN1 327 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 TMEM98Q9Y2Y6 226 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 SESN1Q9Y6P5 492 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 RUSC2Q8N2Y8 1516 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 WDR97A6NE52 1622 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 CAMSAP1Q5T5Y3 1602 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 FGD5Q6ZNL6 1462 aa1.69□□□□□ -2.14
LRCH3-209ENST00000452660 FRMPD1Q5SYB0 1578 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 TTC37Q6PGP7 1564 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 RGS12O14924 1447 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 NCOA1Q15788 1441 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 UHRF1BP1Q6BDS2 1440 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 HYKKA2RU49 373 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ZNF840PA6NDX5 716 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PI4K2BG5E9Z4 385 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 TRAFD1O14545 582 aaPredicted RBP1.68□□□□□ -2.14
LRCH3-209ENST00000452660 GALR3O60755 368 aaPredicted RBP1.68□□□□□ -2.14
LRCH3-209ENST00000452660 MED24O75448 989 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 MGMTP16455 207 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 LHCGRP22888 699 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PON1P27169 355 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ETV5P41161 510 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PPIAP62937 165 aaKnown RBP1.68□□□□□ -2.14
LRCH3-209ENST00000452660 EIPR1Q53HC9 387 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 TMEM154Q6P9G4 183 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 C3P1Q6ZMU1 363 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 LEKR1Q6ZMV7 388 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ZER1Q7Z7L7 766 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 COMMD2Q86X83 199 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 SCYL3Q8IZE3 742 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ESX1Q8N693 406 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 TYMSOSQ8TAI1 123 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 CHPT1Q8WUD6 406 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 APOBEC4Q8WW27 367 aaKnown RBP1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ZUFSPQ96AP4 578 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ELMOD3Q96FG2 381 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 SPAG5Q96R06 1193 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 RAD9AQ99638 391 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 C16orf70Q9BSU1 422 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 MUC13Q9H3R2 512 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PLK3Q9H4B4 646 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 RRN3Q9NYV6 651 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 RHCGQ9UBD6 479 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 C19orf25Q9UFG5 118 aaPredicted RBP1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PPP2R2CQ9Y2T4 447 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 PCDHGA5Q9Y5G8 931 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ARID2Q68CP9 1835 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 ADAMTS12P58397 1594 aa1.68□□□□□ -2.14
LRCH3-209ENST00000452660 EP400Q96L91 3159 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CD109Q6YHK3 1445 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 KIAA0586Q9BVV6 1533 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 LRP6O75581 1613 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ZCCHC11Q5TAX3 1644 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms