RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC5A12Q1EHB4 618 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 KBTBD12Q3ZCT8 623 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 TAF1BQ53T94 588 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-202ENST00000452372 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.26■□□□□ 0.67
COL9A3-202ENST00000452372 CCDC81Q6ZN84 652 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 CTAGE3PQ8IX95 158 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 LRRN4CLQ8ND94 238 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 DENND1AQ8TEH3 1009 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 SLC22A18Q96BI1 424 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 VPS39Q96JC1 886 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 TRAPPC9Q96Q05 1148 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 OR6C1Q96RD1 312 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 CTRCQ99895 268 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 RHOXF2Q9BQY4 288 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 NINJ2Q9NZG7 142 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 SDK2Q58EX2 2172 aa19.26■□□□□ 0.67
COL9A3-202ENST00000452372 KRT87PA6NCN2 255 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 PRICKLE3O43900 615 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 TSPAN12O95859 305 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 FGF5P12034 268 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 PLA2G2AP14555 144 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 FOLR1P15328 257 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 ST6GAL1P15907 406 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 GP5P40197 560 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 PGGT1BP53609 377 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 TAS2R39P59534 338 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 ACY1Q03154 408 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 CYP2A13Q16696 494 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 TMTC4Q5T4D3 741 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 CYB5D1Q6P9G0 228 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 UBE2R2Q712K3 238 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 BPHLQ86WA6 291 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 MYO1HQ8N1T3 1032 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 C2orf73Q8N5S3 287 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 PPM1NQ8N819 430 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 LMNTD1Q8N9Z9 388 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 LINGO1Q96FE5 620 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 PDLIM5Q96HC4 596 aaKnown RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 RBBP8Q99708 897 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 NFU1Q9UMS0 254 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 MTO1Q9Y2Z2 717 aaKnown RBP19.25■□□□□ 0.67
COL9A3-202ENST00000452372 BOD1L1Q8NFC6 3051 aa19.25■□□□□ 0.67
COL9A3-202ENST00000452372 ANKRD12Q6UB98 2062 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 TLN1Q9Y490 2541 aaKnown RBP19.24■□□□□ 0.67
COL9A3-202ENST00000452372 A0A0J9YY10 115 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 ESPNB1AK53 854 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 MAP3K7O43318 606 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 C8GP07360 202 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 EBLN1P0CF75 366 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 ERGP11308 486 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 PVRP15151 417 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 SAT1P21673 171 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 MAP4P27816 1152 aaKnown RBP19.24■□□□□ 0.67
COL9A3-202ENST00000452372 PHBP35232 272 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 HSD17B2P37059 387 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 POU4F1Q01851 419 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 NAB1Q13506 487 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 KCNAB1Q14722 419 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 ARHGAP19Q14CB8 494 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 GRTP1Q5TC63 336 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 ZFAND4Q86XD8 727 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 DTX1Q86Y01 620 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 PKP4Q99569 1192 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 SLC12A9Q9BXP2 914 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 SPRY4Q9C004 299 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
COL9A3-202ENST00000452372 PDE7BQ9NP56 450 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 SOHLH2Q9NX45 425 aa19.24■□□□□ 0.67
COL9A3-202ENST00000452372 SLC16A5O15375 505 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 ZIC2O95409 532 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-202ENST00000452372 OAS2P29728 719 aaKnown RBP19.23■□□□□ 0.67
COL9A3-202ENST00000452372 SPRP35270 261 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-202ENST00000452372 TUBB4BP68371 445 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 TUBB3Q13509 450 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 SF1Q15637 639 aaKnown RBP19.23■□□□□ 0.67
COL9A3-202ENST00000452372 TMEM207Q6UWW9 146 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 ZNF605Q86T29 641 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 TRIM73Q86UV7 250 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 TAX1BP1Q86VP1 789 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 PPP1R3BQ86XI6 285 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 CEP97Q8IW35 865 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 MCOLN3Q8TDD5 553 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 DLG3Q92796 817 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 GPR22Q99680 433 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 FUT8Q9BYC5 575 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 CHRNA10Q9GZZ6 450 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 PARVBQ9HBI1 364 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 POPDC3Q9HBV1 291 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 SYTL2Q9HCH5 934 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 FGF21Q9NSA1 209 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 ADAMTS6Q9UKP5 1117 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 RARRES3Q9UL19 164 aa19.23■□□□□ 0.67
COL9A3-202ENST00000452372 BSNQ9UPA5 3926 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 SPTBP11277 2137 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 STMND1H3BQB6 276 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 FKBP9O95302 570 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 SLC16A8O95907 504 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 MSL3P1P0C860 447 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 LIPCP11150 499 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms