RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ARHGEF33A8MVX0 844 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 H3BMM5 538 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 MKRN2OSH3BPM6 223 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 K7EM74 188 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 S1PR4O95977 384 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 TCP1P17987 556 aaKnown RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 AGXTP21549 392 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 ALAS2P22557 587 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 MCM3P25205 808 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 GABRA4P48169 554 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 YBX1P67809 324 aaKnown RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 RAPSNQ13702 412 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 CRYMQ14894 314 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 UGT8Q16880 541 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 HSP90AA5PQ58FG0 334 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 FCRL6Q6DN72 434 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 ZNF549Q6P9A3 640 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 ATG14Q6ZNE5 492 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 TTLL10Q6ZVT0 673 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 CPNE9Q8IYJ1 553 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 DTWD1Q8N5C7 304 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
USP54-207ENST00000451492 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 DENND1AQ8TEH3 1009 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 RAD51AP1Q96B01 352 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 SLC22A18Q96BI1 424 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 CFAP36Q96G28 342 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 SIGLEC10Q96LC7 697 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 PWWP2AQ96N64 755 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 TCF12Q99081 682 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 NDNQ99608 321 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 GPR21Q99679 349 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 GPR87Q9BY21 358 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 ACSS2Q9NR19 701 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 INTS7Q9NVH2 962 aaKnown RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 INTS10Q9NVR2 710 aaKnown RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 IFT80Q9P2H3 777 aaPredicted RBP9.31□□□□□ -0.92
USP54-207ENST00000451492 TLK1Q9UKI8 766 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 TCFL5Q9UL49 500 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 PLCL2Q9UPR0 1127 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 CHMP2BQ9UQN3 213 aa9.31□□□□□ -0.92
USP54-207ENST00000451492 HEATR5BQ9P2D3 2071 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 A0A0J9YVX5 310 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 A6NL46 340 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 CES2O00748 559 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 TTI1O43156 1089 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 HAUS5O94927 633 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 EIF2S1P05198 315 aaKnown RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 CAPN1P07384 714 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 HBQ1P09105 142 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 MSL3P1P0C860 447 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 ERVK-10P10266 1014 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 PGAM1P18669 254 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 RPA3P35244 121 aaPredicted RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 CCNFP41002 786 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 MAGEA3P43357 314 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 CCL11P51671 97 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 CLCN7P51798 805 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 PMS2P54278 862 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 VSX2P58304 361 aaPredicted RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 MRPS25P82663 173 aaKnown RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 DR1Q01658 176 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 TLE1Q04724 770 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 ATP1A4Q13733 1029 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 NCF4Q15080 339 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 TTLL9Q3SXZ7 439 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 MSS51Q4VC12 460 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 FIGLAQ6QHK4 219 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 TMEM151BQ8IW70 566 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 C17orf53Q8N3J3 647 aaPredicted RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 DNAJC22Q8N4W6 341 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 CALML6Q8TD86 181 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 MAGEC3Q8TD91 643 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 LRFN5Q96NI6 719 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 SELENOSQ9BQE4 189 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 FAM167BQ9BTA0 163 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 NDC1Q9BTX1 674 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 EPN3Q9H201 632 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 PPANQ9NQ55 473 aaKnown RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 EURLQ9NYK6 297 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 TUBD1Q9UJT1 453 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 PTRH2Q9Y3E5 179 aaKnown RBP9.3□□□□□ -0.92
USP54-207ENST00000451492 MED13Q9UHV7 2174 aa9.3□□□□□ -0.92
USP54-207ENST00000451492 FASNP49327 2511 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 MAGEB16A2A368 324 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 H3BMH7 237 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MASP2O00187 686 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 SUV39H1O43463 412 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 VPS26AO75436 327 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MATN4O95460 622 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 CATP04040 527 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 PDGFAP04085 211 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 RAB40ALP0C0E4 278 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 FOLR3P41439 243 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 CARSP49589 748 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms