RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MTBPQ96DY7 904 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 VPS39Q96JC1 886 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 STMN4Q9H169 189 aaPredicted RBP16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 OR52A5Q9H2C5 316 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 TMBIM4Q9HC24 238 aa16.53■□□□□ 0.24
PRPF40A-204ENST00000450303 SMIM23A6NLE4 172 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 E5RI56 91 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 OR1I1O60431 355 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 TIAF1O95411 115 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 FTH1P02794 183 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 ITGB2P05107 769 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 SNRPAP09012 282 aaKnown RBP16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 GSTM1P09488 218 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 EBLN1P0CF75 366 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 PRKAR1AP10644 381 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 FGF5P12034 268 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 GABRB3P28472 473 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 KPNA2P52292 529 aaKnown RBP16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 GSTM4Q03013 218 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 ABHD18Q0P651 414 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 PRKG2Q13237 762 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 IL11RAQ14626 422 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 KRT71Q3SY84 523 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 ZNF789Q5FWF6 425 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 C6orf15Q6UXA7 325 aaPredicted RBP16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 PPP1R3BQ86XI6 285 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 GPATCH11Q8N954 259 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 DCAKDQ8WVC6 231 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 TSPAN17Q96FV3 270 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 SLC41A2Q96JW4 573 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 DHRS4Q9BTZ2 278 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 P2RY12Q9H244 342 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 TRIT1Q9H3H1 467 aaKnown RBP16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 SEMA5BQ9P283 1151 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 HEBP2Q9Y5Z4 205 aa16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 MRPS18BQ9Y676 258 aaKnown RBP16.52■□□□□ 0.24
PRPF40A-204ENST00000450303 COL6A6A6NMZ7 2263 aa16.52■□□□□ 0.23
PRPF40A-204ENST00000450303 CFAP46Q8IYW2 2715 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 FAM95CA0A1B0GW59 222 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 TLCD2A6NGC4 264 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ZNF891A8MT65 544 aaPredicted RBP16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 KPNA5O15131 536 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 VPS26AO75436 327 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 FAM155BO75949 473 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 CHRM3P20309 590 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 F8A1P23610 371 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 NDUFS1P28331 727 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ATP5DP30049 168 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 STAT5AP42229 794 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 SLCO1A2P46721 670 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 POU4F1Q01851 419 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 TUBB3Q13509 450 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 TTMPQ5BVD1 217 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ESX1Q8N693 406 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ACVR1CQ8NER5 493 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 EPS8L3Q8TE67 593 aaKnown RBP16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 LCN9Q8WX39 176 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ELMO1Q92556 727 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ARL8AQ96BM9 186 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 ZBTB9Q96C00 473 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 SLC45A3Q96JT2 553 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 GPR22Q99680 433 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 AARSD1Q9BTE6 412 aaKnown RBP16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 HGH1Q9BTY7 390 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 CAPS2Q9BXY5 557 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 SRMSQ9H3Y6 488 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 XKR8Q9H6D3 395 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 PDE7BQ9NP56 450 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 TAS2R13Q9NYV9 303 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 RARRES3Q9UL19 164 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 VWA7Q9Y334 891 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 NFS1Q9Y697 457 aa16.51■□□□□ 0.23
PRPF40A-204ENST00000450303 GSAPA4D1B5 854 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 BTN3A3O00478 584 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 ITGB6P18564 788 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 GCAP28676 217 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 DLSTP36957 453 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 SKIV2L2P42285 1042 aaKnown RBP16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 ZNF844Q08AG5 666 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 PRKAA1Q13131 559 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 USP10Q14694 798 aaKnown RBP16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 TMED2Q15363 201 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 GPR19Q15760 415 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 ATP1A1-AS1Q5TC04 95 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 MROH9Q5TGP6 573 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 HECTD2Q5U5R9 776 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 PWWP2BQ6NUJ5 590 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 C16orf46Q6P387 395 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 OR52E1Q8NGJ3 308 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 TFGQ92734 400 aaPredicted RBP16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 BIRC8Q96P09 236 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 CD180Q99467 661 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 MCMBPQ9BTE3 642 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 FGF21Q9NSA1 209 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 CROTQ9UKG9 612 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms