RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MID1IP1Q9NPA3 183 aa13.16□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 MLYCDO95822 493 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ANGPTL1O95841 491 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 FGF4P08620 206 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CD6P30203 668 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 PGGT1BP53609 377 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 YWHAHQ04917 246 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 DCP1BQ8IZD4 617 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 TESCQ96BS2 214 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 MBOAT4Q96T53 435 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 FEM1AQ9BSK4 669 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ALG2Q9H553 416 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 DIMT1Q9UNQ2 313 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 G3V2T6 193 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CCR1P32246 355 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 HNF4AP41235 474 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 IL5RAQ01344 420 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 GPNMBQ14956 572 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZMYND11Q15326 602 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 PLA2G4EQ3MJ16 856 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ACVR1CQ8NER5 493 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 USB1Q9BQ65 265 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC25A51Q9H1U9 297 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 TNKS2Q9H2K2 1166 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CCDC59Q9P031 241 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 UPK1AO00322 258 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 AIREO43918 545 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 DNTTP04053 509 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CHRM3P20309 590 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 YWHAQP27348 245 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 GSK3BP49841 420 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 TSTD2Q5T7W7 516 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 DENND6AQ8IWF6 608 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CPA6Q8N4T0 437 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 STAG3L4Q8TBR4 150 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 UBASH3BQ8TF42 649 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 PGLYRP2Q96PD5 576 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 POLG2Q9UHN1 485 aa13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYNGAP1-204ENST00000449372 LOC100130705A0A1B0GUX0 176 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 CLDN24A6NM45 220 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 ATG13O75143 517 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 EOMESO95936 686 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 HPRP00739 348 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 CLEC2LP0C7M8 214 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 PCSK2P16519 638 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 EVI2BP34910 448 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 FADDQ13158 208 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 PHC2Q8IXK0 858 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 RYBPQ8N488 228 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 DNAJB14Q8TBM8 379 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 HASPINQ8TF76 798 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 LRRC58Q96CX6 371 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR2A14Q96R47 310 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 FBRSL1Q9HCM7 1045 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF224Q9NZL3 707 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 COMMD10Q9Y6G5 202 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 A3GALT2U3KPV4 340 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 PRMT5O14744 637 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 GLP2RO95838 553 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 GZMKP49863 264 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 COX10Q12887 443 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 XKRXQ6PP77 449 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 CHCHD4Q8N4Q1 142 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 BPIFB1Q8TDL5 484 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MMP28Q9H239 520 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 ALG9Q9H6U8 611 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 SP110Q9HB58 689 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 EVA1BQ9NVM1 165 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 STOML2Q9UJZ1 356 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MYO18AQ92614 2054 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 C9JVG2 144 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 RGS5O15539 181 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 FMO3P31513 532 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 RPS5P46782 204 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MASP1P48740 699 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 NOGQ13253 232 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 FUT11Q495W5 492 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MANEALQ5VSG8 457 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 LETMD1Q6P1Q0 360 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 LARP4Q71RC2 724 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 SETD9Q8NE22 299 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR8H1Q8NGG4 311 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 VANGL1Q8TAA9 524 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 SCAMP5Q8TAC9 235 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 EDEM1Q92611 657 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms