RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PCM1Q15154 2024 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 FAM221BA6H8Z2 402 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 PPP6CO00743 305 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 NOBOXO60393 691 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 OTCP00480 354 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 ANXA6P08133 673 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 GIMD1P0DJR0 217 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 ALOX15P16050 662 aaPredicted RBP18.66■□□□□ 0.58
RPS28-202ENST00000449223 RPL14P50914 215 aaKnown RBP18.66■□□□□ 0.58
RPS28-202ENST00000449223 CDC16Q13042 620 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 TRAF3Q13114 568 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 HLA-BQ31612 363 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 TRIM61Q5EBN2 209 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 PLA2G2CQ5R387 149 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.66■□□□□ 0.58
RPS28-202ENST00000449223 CPLX4Q7Z7G2 160 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 THOC6Q86W42 341 aaKnown RBP18.66■□□□□ 0.58
RPS28-202ENST00000449223 SLC25A45Q8N413 288 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 LINC01555Q8NAE3 123 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 OR52B6Q8NGF0 335 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 PATE1Q8WXA2 126 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 SMPDL3AQ92484 453 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 OR4K3Q96R72 315 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 MIPEPQ99797 713 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 UCK1Q9HA47 277 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 ZDHHC2Q9UIJ5 367 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 DOLKQ9UPQ8 538 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 R4GN57 208 aa18.66■□□□□ 0.58
RPS28-202ENST00000449223 PRAMEF33A0A0G2JMD5 474 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 SLCO1B7G3V0H7 640 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 ARHGAP33O14559 1287 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 UGDHO60701 494 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 VIPP01282 170 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 CFIP05156 583 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 MPSTP25325 297 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 SHMT2P34897 504 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 MPLP40238 635 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 FASTKQ14296 549 aaKnown RBP18.65■□□□□ 0.58
RPS28-202ENST00000449223 GGTA1PQ4G0N0 100 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 LAIR1Q6GTX8 287 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 LCTLQ6UWM7 567 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 PIGWQ7Z7B1 504 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 TRIM48Q8IWZ4 208 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 PPFIBP2Q8ND30 876 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 GPR156Q8NFN8 814 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 MAPK15Q8TD08 544 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 SAP25Q8TEE9 199 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 IL17FQ96PD4 163 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 PCBD2Q9H0N5 130 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 NOL11Q9H8H0 719 aaKnown RBP18.65■□□□□ 0.58
RPS28-202ENST00000449223 TNFRSF12AQ9NP84 129 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 MID1IP1Q9NPA3 183 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 PLAGL1Q9UM63 463 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 ANGPTL3Q9Y5C1 460 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 ARID1BQ8NFD5 2236 aaPredicted RBP18.65■□□□□ 0.58
RPS28-202ENST00000449223 ADAMTS9Q9P2N4 1935 aa18.65■□□□□ 0.58
RPS28-202ENST00000449223 A0A1B0GTL3 188 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 A0A1W2PPV9 198 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 MATN2O00339 956 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 SDC3O75056 442 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 SYPP08247 313 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 EBLN1P0CF75 366 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 NPPBP16860 134 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 PRDX3P30048 256 aaKnown RBP18.64■□□□□ 0.58
RPS28-202ENST00000449223 CASP2P42575 452 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 HHEXQ03014 270 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 BNIP3Q12983 259 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 GPR18Q14330 331 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 GPRIN3Q6ZVF9 776 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 WDR75Q8IWA0 830 aaKnown RBP18.64■□□□□ 0.58
RPS28-202ENST00000449223 STON2Q8WXE9 905 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 MED8Q96G25 268 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 FAR2Q96K12 515 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 MAGEB10Q96LZ2 347 aaPredicted RBP18.64■□□□□ 0.58
RPS28-202ENST00000449223 LRFN3Q9BTN0 628 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 TRIM55Q9BYV6 548 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 KLHL14Q9P2G3 628 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 RAB23Q9ULC3 237 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 KCNE2Q9Y6J6 123 aa18.64■□□□□ 0.58
RPS28-202ENST00000449223 PATE3B3GLJ2 98 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 B4DGG1 531 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 PRICKLE3O43900 615 aaPredicted RBP18.64■□□□□ 0.57
RPS28-202ENST00000449223 SNX3O60493 162 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 CER1O95813 267 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 TROVE2P10155 538 aaKnown RBP eCLIP18.64■□□□□ 0.57
RPS28-202ENST00000449223 TSPAN8P19075 237 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 GNAZP19086 355 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 CCNG1P51959 295 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 GABPB1Q06547 395 aaPredicted RBP18.64■□□□□ 0.57
RPS28-202ENST00000449223 RBBP7Q16576 425 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 SH2D4BQ5SQS7 431 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 TMEM26Q6ZUK4 368 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 SYVN1Q86TM6 617 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 AMIGO1Q86WK6 493 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 SFTPA2Q8IWL1 248 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 CLYBLQ8N0X4 340 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 L3MBTL4Q8NA19 623 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 LCN9Q8WX39 176 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 WDR34Q96EX3 536 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms