RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 C19orf57Q0VDD7 668 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 COL9A2Q14055 689 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 FRG1Q14331 258 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 TEDDM1Q5T9Z0 273 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 TTC23LQ6PF05 361 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 BORAQ6PGQ7 559 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 FIGLAQ6QHK4 219 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 KIAA0408Q6ZU52 694 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 GALNT7Q86SF2 657 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 OR9A1PQ8NGU1 263 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 CD200R1Q8TD46 325 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 ZUFSPQ96AP4 578 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 KRT12Q99456 494 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 GPR21Q99679 349 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 ACTR5Q9H9F9 607 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 STARD5Q9NSY2 213 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 SLC39A10Q9ULF5 831 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 COMMD10Q9Y6G5 202 aa13.54□□□□□ -0.24
RTFDC1-204ENST00000449062 EIF4E1BA6NMX2 242 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MAP3K7O43318 606 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 KATNA1O75449 491 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 RAB40ALP0C0E4 278 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MPC1LP0DKB6 136 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 PRKAR1AP10644 381 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 PTPN4P29074 926 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 GRIA3P42263 894 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 FASTKQ14296 549 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 SF1Q15637 639 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 LRRC56Q8IYG6 542 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MAGEC3Q8TD91 643 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 SKA2Q8WVK7 121 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 DLG3Q92796 817 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MR1Q95460 341 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 SNF8Q96H20 258 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 FOPNLQ96NB1 174 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 PKP4Q99569 1192 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 ERP44Q9BS26 406 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 ACTL8Q9H568 366 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 FANCEQ9HB96 536 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 EURLQ9NYK6 297 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 SPATA7Q9P0W8 599 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 PLCL2Q9UPR0 1127 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 SNX24Q9Y343 169 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 KCNMB2Q9Y691 235 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 MED13Q9UHV7 2174 aa13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-204ENST00000449062 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 E5RI56 91 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 E7EQ34 232 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CTSVO60911 334 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 OR2B3O76000 313 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ONECUT2O95948 504 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CBSLP0DN79 551 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ENO3P13929 434 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CYP2A7P20853 494 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CBSP35520 551 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 SKIV2L2P42285 1042 aaKnown RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CARSP49589 748 aaKnown RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CDKN2DP55273 166 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CUL1Q13616 776 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ERV3-1Q14264 604 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ARHGAP19Q14CB8 494 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 HIF1AQ16665 826 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 DUPD1Q68J44 220 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 RHBDD2Q6NTF9 364 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 C16orf46Q6P387 395 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 FBXO42Q6P3S6 717 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 FAM198BQ6UWH4 519 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ZNF572Q7Z3I7 529 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 TAX1BP1Q86VP1 789 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 OR2L3Q8NG85 312 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ADAMTS17Q8TE56 1095 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 CERS2Q96G23 380 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 GBP5Q96PP8 586 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 NLNQ9BYT8 704 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ADNPQ9H2P0 1102 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC17A6Q9P2U8 582 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 ZC3H7BQ9UGR2 993 aaKnown RBP13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 AP1M2Q9Y6Q5 423 aa13.52□□□□□ -0.25
RTFDC1-204ENST00000449062 TENM4Q6N022 2769 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 FLNCQ14315 2725 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 FER1L5A0AVI2 2057 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 FAM187AA6NFU0 413 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 B8ZZF3 427 aa13.51□□□□□ -0.25
RTFDC1-204ENST00000449062 E7ENX8 843 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms