RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC32A1Q9H598 525 aa13.61□□□□□ -0.23
SHMT2-203ENST00000449049 ACSS2Q9NR19 701 aa13.61□□□□□ -0.23
SHMT2-203ENST00000449049 OR6C2Q9NZP2 312 aa13.61□□□□□ -0.23
SHMT2-203ENST00000449049 OPTCQ9UBM4 332 aa13.61□□□□□ -0.23
SHMT2-203ENST00000449049 ADAM21Q9UKJ8 722 aa13.61□□□□□ -0.23
SHMT2-203ENST00000449049 ARHGEF17Q96PE2 2063 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-203ENST00000449049 LILRA5A6NI73 299 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SIGLEC6O43699 453 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CCNT2O60583 730 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SNNO75324 88 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 WDR47O94967 919 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CCND1P24385 295 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 BST1Q10588 318 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 STX3Q13277 289 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 PLCL1Q15111 1095 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CAPN13Q6MZZ7 669 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 ZNF438Q7Z4V0 828 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 JPH3Q8WXH2 748 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SMPDL3AQ92484 453 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 MED8Q96G25 268 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 NSUN5Q96P11 429 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 ZBTB26Q9HCK0 441 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 PARD6AQ9NPB6 346 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CCDC177Q9NQR7 707 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 INTS7Q9NVH2 962 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 RNF215Q9Y6U7 377 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 LY6G6EA0A0G2JKS1 128 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 A0A1W2PPV9 198 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 GLB1P16278 677 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 TGM1P22735 817 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 ARRB2P32121 409 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 PIK3CGP48736 1102 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 GALNT1Q10472 559 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 GTF2H2Q13888 395 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 RCN2Q14257 317 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 NR1D2Q14995 579 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 CFAP157Q5JU67 520 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 GTF2H2CQ6P1K8 395 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 RPS27LQ71UM5 84 aaKnown RBP13.6□□□□□ -0.23
SHMT2-203ENST00000449049 GOLGA7Q7Z5G4 137 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 ADGRF3Q8IZF5 1079 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 EID2Q8N6I1 236 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 OR4E2Q8NGC2 313 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 OR4K3Q96R72 315 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 TRMOQ9BU70 441 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 EDEM2Q9BV94 578 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SLC22A14Q9Y267 594 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 U3KQA8 63 aa13.6□□□□□ -0.23
SHMT2-203ENST00000449049 SDK1Q7Z5N4 2213 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 PRICKLE3O43900 615 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-203ENST00000449049 EPORP19235 508 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 CDH13P55290 713 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 ABCE1P61221 599 aaKnown RBP13.59□□□□□ -0.23
SHMT2-203ENST00000449049 CLCQ05315 142 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 NR0B2Q15466 257 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 SUSD1Q6UWL2 747 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 ZNF761Q86XN6 746 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-203ENST00000449049 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 TEX9Q8N6V9 391 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 PPP4R1Q8TF05 950 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 TBC1D10AQ9BXI6 508 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 C20orf27Q9GZN8 174 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 LRIT1Q9P2V4 623 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 PADI4Q9UM07 663 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 HCN4Q9Y3Q4 1203 aa13.59□□□□□ -0.23
SHMT2-203ENST00000449049 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-203ENST00000449049 RALGAPA1Q6GYQ0 2036 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 BTN3A3O00478 584 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 ITM2AO43736 263 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 CHRM5P08912 532 aaPredicted RBP13.58□□□□□ -0.23
SHMT2-203ENST00000449049 EPB42P16452 691 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 CCR10P46092 362 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 SLC1A6P48664 564 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 EPHA4P54764 986 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 LCP2Q13094 533 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 SLC14A1Q13336 389 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 BIRC2Q13490 618 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 PRAMEF13Q5VWM6 474 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 LCTLQ6UWM7 567 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 PRR23CQ6ZRP0 262 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 C2orf73Q8N5S3 287 aaPredicted RBP13.58□□□□□ -0.23
SHMT2-203ENST00000449049 SETD7Q8WTS6 366 aaKnown RBP13.58□□□□□ -0.23
SHMT2-203ENST00000449049 SLC38A3Q99624 504 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 MIPEPQ99797 713 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 PCBD2Q9H0N5 130 aa13.58□□□□□ -0.23
SHMT2-203ENST00000449049 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms