RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LIFP15018 202 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 PVRP15151 417 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 FOLR1P15328 257 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 ST6GAL1P15907 406 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 KCNAB2Q13303 367 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 TUBB2AQ13885 445 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 UBAP2LQ14157 1087 aaKnown RBP14.07□□□□□ -0.16
USP39-206ENST00000448971 IL11RAQ14626 422 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 KYNUQ16719 465 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
USP39-206ENST00000448971 TEDDM1Q5T9Z0 273 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 UGT3A1Q6NUS8 523 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 CLEC18BQ6UXF7 455 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 LURAP1LQ8IV03 231 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 PALM2Q8IXS6 379 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 IL22RA1Q8N6P7 574 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 CLEC18CQ8NCF0 446 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 FBXO25Q8TCJ0 367 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 LRRC1Q9BTT6 524 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 TUBB2BQ9BVA1 445 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 PITPNM3Q9BZ71 974 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 EPN3Q9H201 632 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 FAM114A2Q9NRY5 505 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 FGF21Q9NSA1 209 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 SPHK1Q9NYA1 384 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 TAS2R13Q9NYV9 303 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 SPATA7Q9P0W8 599 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 LNPEPQ9UIQ6 1025 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 TUBD1Q9UJT1 453 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 MED16Q9Y2X0 877 aa14.07□□□□□ -0.16
USP39-206ENST00000448971 NBPF19A0A087WUL8 3843 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 A0A0J9YY10 115 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 KRT87PA6NCN2 255 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 CD9P21926 228 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 MCM3P25205 808 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 POLE2P56282 527 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 TUBB4BP68371 445 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 FRG1Q14331 258 aaKnown RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 GRB7Q14451 532 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 KIR2DS3Q14952 304 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 GPR19Q15760 415 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 LRRC8EQ6NSJ5 796 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 NEK10Q6ZWH5 1172 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 GALNT7Q86SF2 657 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 D2HGDHQ8N465 521 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 C2orf73Q8N5S3 287 aaPredicted RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 C19orf47Q8N9M1 422 aaKnown RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 LMNTD1Q8N9Z9 388 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 OR2L8Q8NGY9 312 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 CDKL2Q92772 493 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 INPP5DQ92835 1189 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 TRAPPC9Q96Q05 1148 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 PHACTR1Q9C0D0 580 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 NSMCE4AQ9NXX6 385 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 KLHL42Q9P2K6 505 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 CORO1CQ9ULV4 474 aaPredicted RBP14.06□□□□□ -0.16
USP39-206ENST00000448971 DHRS7Q9Y394 339 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 ICE1Q9Y2F5 2266 aa14.06□□□□□ -0.16
USP39-206ENST00000448971 ARHGEF33A8MVX0 844 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 PSIP1O75475 530 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 KIAA0754O94854 1291 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 MATN4O95460 622 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 SYF2O95926 243 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 AHSGP02765 367 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 MPC1LP0DKB6 136 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 CBSLP0DN79 551 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 FGF5P12034 268 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 GABRB3P28472 473 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 PEBP1P30086 187 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 SSTR1P30872 391 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 CBSP35520 551 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 CASRP41180 1078 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 RGS4P49798 205 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 TSTA3Q13630 321 aaPredicted RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 IGFBP7Q16270 282 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP39-206ENST00000448971 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 HECTD2Q5U5R9 776 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 ZDHHC24Q6UX98 284 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 PIWIL4Q7Z3Z4 852 aaKnown RBP14.05□□□□□ -0.16
USP39-206ENST00000448971 STRA8Q7Z7C7 330 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 TMEM126BQ8IUX1 230 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 MYO1HQ8N1T3 1032 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 LINC01555Q8NAE3 123 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 SLC22A18Q96BI1 424 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 OR2A14Q96R47 310 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 MENTQ9BUN1 341 aa14.05□□□□□ -0.16
USP39-206ENST00000448971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms