RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 AGTP01019 485 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CLUP10909 449 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ACPPP15309 386 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 HOXD9P28356 352 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 INPP1P49441 399 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMED10P49755 219 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR1D5P58170 312 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATP6V0D1P61421 351 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF155Q12901 538 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPRC6AQ5T6X5 926 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ENPP6Q6UWR7 440 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CES3Q6UWW8 571 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 R3HCC1LQ7Z5L2 792 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ADGRG6Q86SQ4 1221 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIML2Q8N7C3 387 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.532e-7■■□□□ 13
CDC42BPA-209ENST00000448940 METTL6Q8TCB7 284 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SELENOMQ8WWX9 145 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CAMK1GQ96NX5 476 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRRC37BQ96QE4 947 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 OSBPL7Q9BZF2 842 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 UBTD1Q9HAC8 227 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PPP1R14DQ9NXH3 145 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 RIMKLBQ9ULI2 386 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CA5BQ9Y2D0 317 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SHROOM3Q8TF72 1996 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CTIFO43310 598 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 WDR47O94967 919 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ABCB1P08183 1280 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 RPL22P35268 128 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCR2P41597 374 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DCTN2Q13561 401 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 LAPTM5Q13571 262 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DPYSL2Q16555 572 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SAMD14Q8IZD0 417 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CISD2Q8N5K1 135 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GALNT6Q8NCL4 622 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ETNK1Q9HBU6 452 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CSNK1G1Q9HCP0 422 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 OLAHQ9NV23 265 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CYTH4Q9UIA0 394 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GRID1Q9ULK0 1009 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CFL2Q9Y281 166 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 L3MBTL1Q9Y468 752 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 RNF215Q9Y6U7 377 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.49□□□□□ -1.533e-11■■■□□ 16.9
CDC42BPA-209ENST00000448940 PTPRQQ9UMZ3 2332 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC30A4O14863 429 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CLIC3O95833 236 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 POU3F3P20264 500 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCND1P24385 295 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 NKAIN2Q5VXU1 208 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SEL1L3Q68CR1 1132 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 UNQ6126/PRO20091Q6UXV3 157 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MON1BQ7L1V2 547 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PARS2Q7L3T8 475 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ARHGAP24Q8N264 748 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MEIOBQ8N635 442 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SPATA22Q8NHS9 363 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC22A8Q8TCC7 542 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPBAR1Q8TDU6 330 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 FATE1Q969F0 183 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRGUKQ96M69 825 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC2A13Q96QE2 648 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 NKIRAS2Q9NYR9 191 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MARK1Q9P0L2 795 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 COPG2Q9UBF2 871 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ENTPD2Q9Y5L3 495 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 VILLO15195 856 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNUPNO95149 360 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATP1B2P14415 290 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAGEA4P43358 317 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPLD1P80108 840 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 CILP2Q8IUL8 1156 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR13H1Q8NG92 308 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRRC39Q96DD0 335 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLEKHA8Q96JA3 519 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 B3GAT2Q9NPZ5 323 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 FBXO6Q9NRD1 293 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 NAV3Q8IVL0 2385 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRKCHP24723 683 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 HSD17B3P37058 310 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 HK3P52790 923 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 GNB2P62879 340 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 TIGD6Q17RP2 521 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 TXNDC11Q6PKC3 985 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC22A9Q8IVM8 553 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PTCD2Q8WV60 388 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 WWP1Q9H0M0 922 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 RUVBL1Q9Y265 456 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DOCK2Q92608 1830 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 B2RBV5 119 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 RTCAO00442 366 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 SEC14L5O43304 696 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 AP2A2O94973 939 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PAHP00439 452 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 EEF1A2Q05639 463 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms