RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 SLC15A3Q8IY34 581 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 ZNF480Q8WV37 535 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 PCDHAC1Q9H158 963 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 OR52A5Q9H2C5 316 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 CMTM6Q9NX76 183 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 UNC80Q8N2C7 3258 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 COL4A2P08572 1712 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 GRXCR2A6NFK2 248 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 TRIM23P36406 574 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 ATXN3P54252 364 aaPredicted RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 INPP5AQ14642 412 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 STARD3Q14849 445 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 PTGR1Q14914 329 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 IRF4Q15306 451 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 FRG2Q64ET8 278 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 SUSD1Q6UWL2 747 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 TP53I13Q8NBR0 393 aaPredicted RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 FRG2BQ96QU4 278 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 C1QTNF2Q9BXJ5 285 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 ZDHHC5Q9C0B5 715 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 FBXL12Q9NXK8 326 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 COL6A3P12111 3177 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 IFRD1O00458 451 aaPredicted RBP17.18■□□□□ 0.34
LMNA-208ENST00000448611 PLRG1O43660 514 aaKnown RBP17.18■□□□□ 0.34
LMNA-208ENST00000448611 COL9A1P20849 921 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 VARSP26640 1264 aaKnown RBP17.18■□□□□ 0.34
LMNA-208ENST00000448611 MRPS22P82650 360 aaKnown RBP17.18■□□□□ 0.34
LMNA-208ENST00000448611 ZNF33BQ06732 778 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 DOC2AQ14183 400 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 PON2Q15165 354 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 USP39Q53GS9 565 aaKnown RBP17.18■□□□□ 0.34
LMNA-208ENST00000448611 XKR6Q5GH73 641 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 CACHD1Q5VU97 1274 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 SDE2Q6IQ49 451 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 GALNT13Q8IUC8 556 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 LIX1Q8N485 282 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 DPP10Q8N608 796 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 NUDT8Q8WV74 236 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 ZNF570Q96NI8 536 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 SLC6A17Q9H1V8 727 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 FBRSQ9HAH7 460 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 SLC23A2Q9UGH3 650 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 PCDHA9Q9Y5H5 950 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 TRPM6Q9BX84 2022 aa17.18■□□□□ 0.34
LMNA-208ENST00000448611 KLF8O95600 359 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 PAK4O96013 591 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 HOXB2P14652 356 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 RPS21P63220 83 aaKnown RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 RPA4Q13156 261 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 E2F2Q14209 437 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 GRHL2Q6ISB3 625 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 ZFP1Q6P2D0 407 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 SLC2A7Q6PXP3 512 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 UNC5DQ6UXZ4 953 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 RALGPS2Q86X27 583 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 OXR1Q8N573 874 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 OR9A1PQ8NGU1 263 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 WDR20Q8TBZ3 569 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 DNAJC9Q8WXX5 260 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 TMEM125Q96AQ2 219 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 CMTM7Q96FZ5 175 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 SLAMF8Q9P0V8 285 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 GMPR2Q9P2T1 348 aaKnown RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 PSMD13Q9UNM6 376 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 OR1A2Q9Y585 309 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 PIAS3Q9Y6X2 628 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 H0YIV9 168 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 NPPAP01160 153 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 DNTTP04053 509 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 BCKDHAP12694 445 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 HSD17B1P14061 328 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 TAF11Q15544 211 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 MUM1Q2TAK8 710 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 PDZD3Q86UT5 571 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 KIAA2013Q8IYS2 634 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 GANCQ8TET4 914 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 WDR26Q9H7D7 661 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 TM7SF3Q9NS93 570 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
LMNA-208ENST00000448611 BRWD1Q9NSI6 2320 aa17.17■□□□□ 0.34
LMNA-208ENST00000448611 GPR89AB7ZAQ6 455 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 CLGNO14967 610 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 GPR89BP0CG08 455 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 HNF4AP41235 474 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 CASP2P42575 452 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 DGKQP52824 942 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 TBPL1P62380 186 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 MAP7D1Q3KQU3 841 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 SPATS1Q496A3 300 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
LMNA-208ENST00000448611 CAPN13Q6MZZ7 669 aaPredicted RBP17.16■□□□□ 0.34
LMNA-208ENST00000448611 KIAA1161Q6NSJ0 714 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms