RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 UBQLN1Q9UMX0 589 aaKnown RBP15.65■□□□□ 0.1
CNOT3-204ENST00000447684 VPS4AQ9UN37 437 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 ZNF451Q9Y4E5 1061 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 PDHXO00330 501 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 AKR7A2O43488 359 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 PTHP01270 115 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 PM20D1Q6GTS8 502 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 VTCN1Q7Z7D3 282 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 PGBD5Q8N414 524 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 GPR151Q8TDV0 419 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 CCDC32Q9BV29 185 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 SYTL2Q9HCH5 934 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 HEBP1Q9NRV9 189 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 TMEM30AQ9NV96 361 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 C1orf109Q9NX04 203 aa15.65■□□□□ 0.1
CNOT3-204ENST00000447684 DICER1Q9UPY3 1922 aaKnown RBP15.65■□□□□ 0.1
CNOT3-204ENST00000447684 A0A1W2PQ09 198 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 EFCAB10A6NFE3 127 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 E5RI56 91 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SOCS7O14512 581 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 POLR1CO15160 346 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 GJB3O75712 270 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ITGB1P05556 798 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 RETP07949 1114 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MAGEA11P43364 429 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MRPL19P49406 292 aaKnown RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 NPRL3Q12980 569 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MED22Q15528 200 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ZNF648Q5T619 568 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 LSMEM1Q8N8F7 131 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PGAP3Q96FM1 320 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 RIPOR3Q96MK2 946 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SMOQ99835 787 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 AARSD1Q9BTE6 412 aaKnown RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SLC25A51Q9H1U9 297 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ATP13A2Q9NQ11 1180 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PDGFCQ9NRA1 345 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 CATSPERZQ9NTU4 200 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 TAS2R13Q9NYV9 303 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PIRO00625 290 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ZNF780AO75290 641 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PGRP06401 933 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 CCNYL3P0C7X3 344 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PKLRP30613 574 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 RGS6P49758 472 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 HMGCS1Q01581 520 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SOX4Q06945 474 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ABRAXAS2Q15018 415 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PXDC1Q5TGL8 231 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 CACHD1Q5VU97 1274 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MYDGFQ969H8 173 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MAGIXQ9H6Y5 334 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 DYRK4Q9NR20 520 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 TMEM39AQ9NV64 488 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 RABL2AQ9UBK7 228 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 ZNF490Q9ULM2 529 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 NUP214P35658 2090 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 M0R129 80 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SEC22BO75396 215 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PIK3CBP42338 1070 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SLC10A7Q0GE19 358 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 CAMK2GQ13555 558 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 GALNT3Q14435 633 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 DMC1Q14565 340 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 TIGD7Q6NT04 549 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-204ENST00000447684 VN1R5Q7Z5H4 357 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SNX20Q7Z614 316 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 AMIGO1Q86WK6 493 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 GPSM1Q86YR5 675 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 DEDD2Q8WXF8 326 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 C12orf4Q9NQ89 552 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 MIOSQ9NXC5 875 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 PCDHB5Q9Y5E4 795 aa15.64■□□□□ 0.09
CNOT3-204ENST00000447684 SMIM28A0A1B0GU29 152 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 GRXCR2A6NFK2 248 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 B8ZZF3 427 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 J3KR12 359 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 GABRDO14764 452 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 PAGE1O75459 146 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 TSPAN9O75954 239 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 B3GALT4O96024 378 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 FHP07954 510 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 ADORA3P0DMS8 318 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 DNAJA1P31689 397 aaKnown RBP15.63■□□□□ 0.09
CNOT3-204ENST00000447684 TIE1P35590 1138 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 TBCEQ15813 527 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-204ENST00000447684 BTBD16Q32M84 506 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 GALNT7Q86SF2 657 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 FCRL2Q96LA5 508 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-204ENST00000447684 CNPPD1Q9BV87 410 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 DERL2Q9GZP9 239 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 RAD18Q9NS91 495 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 ABCB8Q9NUT2 735 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 SIRT5Q9NXA8 310 aa15.63■□□□□ 0.09
CNOT3-204ENST00000447684 MYBPHLA2RUH7 354 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms