RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 AP4E1Q9UPM8 1137 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 METTL15A6NJ78 407 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 LOC110117498-PIK3R3F6TDL0 507 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 PLK4O00444 970 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ANGPT2O15123 496 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ARHGEF9O43307 516 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 GPR37L1O60883 481 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ZNF780AO75290 641 aaPredicted RBP12.78□□□□□ -0.36
DDX56-206ENST00000446987 OR7A10O76100 309 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 CNTN5O94779 1100 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 NFATC1O95644 943 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 PRLP01236 227 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SLC4A1P02730 911 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 APRTP07741 180 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 THRBP10828 461 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 PSMA2P25787 234 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SLC6A4P31645 630 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SPRP35270 261 aaPredicted RBP12.78□□□□□ -0.36
DDX56-206ENST00000446987 ATP5OP48047 213 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SLC7A2P52569 658 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ARSFP54793 590 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 GPR50Q13585 617 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 DAG1Q14118 895 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ARL13AQ5H913 290 aaPredicted RBP12.78□□□□□ -0.36
DDX56-206ENST00000446987 COQ5Q5HYK3 327 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 TIGD3Q6B0B8 471 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 LYPD8Q6UX82 237 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 CSGALNACT1Q8TDX6 532 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 RORBQ92753 470 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SH3KBP1Q96B97 665 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 ZNF578Q96N58 590 aaPredicted RBP12.78□□□□□ -0.36
DDX56-206ENST00000446987 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 SPHK2Q9NRA0 654 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 MARK1Q9P0L2 795 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 HCN4Q9Y3Q4 1203 aa12.78□□□□□ -0.36
DDX56-206ENST00000446987 MUC22E2RYF6 1773 aaPredicted RBP12.77□□□□□ -0.36
DDX56-206ENST00000446987 A0A0X1KG70 313 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 ZNF487B1APH4 448 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 PI15O43692 258 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 SEMA3DO95025 777 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 EPN2O95208 641 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 IL1R2P27930 398 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX56-206ENST00000446987 GRIA1P42261 906 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 TNK1Q13470 666 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 SLC25A52Q3SY17 297 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 PARP15Q460N3 678 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 CPXM2Q8N436 756 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 HMGCLL1Q8TB92 370 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 FBLIM1Q8WUP2 373 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 RXFP2Q8WXD0 754 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.37
DDX56-206ENST00000446987 CITED4Q96RK1 184 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 C8orf33Q9H7E9 229 aaPredicted RBP12.77□□□□□ -0.37
DDX56-206ENST00000446987 NIPAL2Q9H841 368 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 EIF2B3Q9NR50 452 aaKnown RBP12.77□□□□□ -0.37
DDX56-206ENST00000446987 TMPRSS4Q9NRS4 437 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 ZDHHC2Q9UIJ5 367 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.37
DDX56-206ENST00000446987 TRAPPC4Q9Y296 219 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 NDUFAF1Q9Y375 327 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 CSNK1G3Q9Y6M4 447 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 DOCK4Q8N1I0 1966 aa12.77□□□□□ -0.37
DDX56-206ENST00000446987 TCRBV5S2A0A599 114 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 FAM149AA5PLN7 773 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LINC00862A6NCI5 91 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 M0QYT0 321 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 B4GAT1O43505 415 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 UGT2B17O75795 530 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CDK14O94921 469 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 INMTO95050 263 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 MED26O95402 600 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LATS1O95835 1130 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CHRNGP07510 517 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 ADH5P11766 374 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 GRIA4P48058 902 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 SULT1E1P49888 294 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 LIMK2P53671 638 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 UGT2B15P54855 530 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 PLD3Q8IV08 490 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
DDX56-206ENST00000446987 TCTE3Q8IZS6 198 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
DDX56-206ENST00000446987 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms