RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 EPHA5P54756 1037 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 PFN3P60673 137 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 PON2Q15165 354 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 TEAD2Q15562 447 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 FRG2Q64ET8 278 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 TMEM215Q68D42 235 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 ELMSAN1Q6PJG2 1045 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 STK32CQ86UX6 486 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 TMEM132CQ8N3T6 1108 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 MCOLN3Q8TDD5 553 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 MYLIPQ8WY64 445 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 ELMO1Q92556 727 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 AURKBQ96GD4 344 aaPredicted RBP17.34■□□□□ 0.37
CLDN9-201ENST00000445369 FCRL1Q96LA6 429 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 FRG2BQ96QU4 278 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 INPP5KQ9BT40 448 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 HPS4Q9NQG7 708 aa17.34■□□□□ 0.37
CLDN9-201ENST00000445369 DCAF13Q9NV06 445 aaKnown RBP17.34■□□□□ 0.37
CLDN9-201ENST00000445369 CFAP99D6REC4 459 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 CREG1O75629 220 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 PRKD3O94806 890 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 AP2A2O94973 939 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 TIMP1P01033 207 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 AMD1P17707 334 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 DDX6P26196 483 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLDN9-201ENST00000445369 PLCL1Q15111 1095 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 ZIK1Q3SY52 487 aaPredicted RBP17.33■□□□□ 0.37
CLDN9-201ENST00000445369 CCNYL2Q5T2Q4 361 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 ZDHHC13Q8IUH4 622 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 CLEC4FQ8N1N0 589 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 ZNF557Q8N988 423 aaPredicted RBP17.33■□□□□ 0.37
CLDN9-201ENST00000445369 FRS2Q8WU20 508 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 FBXL8Q96CD0 374 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 MAGEB10Q96LZ2 347 aaPredicted RBP17.33■□□□□ 0.37
CLDN9-201ENST00000445369 RDH12Q96NR8 316 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 MAGIXQ9H6Y5 334 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 TIMMDC1Q9NPL8 285 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 SPHK2Q9NRA0 654 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 NOTCH4Q99466 2003 aa17.33■□□□□ 0.37
CLDN9-201ENST00000445369 TSPAN11A1L157 253 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 G3V2T6 193 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 ZNF701M0R085 212 aaPredicted RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 B3GALT4O96024 378 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 CST1P01037 141 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 GSTM1P09488 218 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 JUPP14923 745 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 CDKN2CP42773 168 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 RECQLP46063 649 aaPredicted RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 HNRNPFP52597 415 aaKnown RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 GSTM4Q03013 218 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 HENMT1Q5T8I9 393 aaKnown RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 MSANTD1Q6ZTZ1 278 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 CYP2U1Q7Z449 544 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 ANKRD46Q86W74 232 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 DDHD1Q8NEL9 900 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 NCLNQ969V3 563 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 FAM120BQ96EK7 910 aaKnown RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 MUS81Q96NY9 551 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 HEPHQ9BQS7 1158 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 NFKBIL1Q9UBC1 381 aaPredicted RBP17.33■□□□□ 0.36
CLDN9-201ENST00000445369 ERVW-1Q9UQF0 538 aa17.33■□□□□ 0.36
CLDN9-201ENST00000445369 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 WNT9AO14904 365 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 LEFTY1O75610 366 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 SLCO2B1O94956 709 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 IL1RNP18510 177 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 SHMT2P34897 504 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 HLCSP50747 726 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 IST1P53990 364 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 CTBSQ01459 385 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 CHIT1Q13231 466 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 Q6ZVL8 140 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 KIAA0907Q7Z7F0 614 aaPredicted RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 SVOPLQ8N434 492 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 TRAM1L1Q8N609 369 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ASZ1Q8WWH4 475 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 SDCCAG3Q96C92 435 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ISOC1Q96CN7 298 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 DTNBP1Q96EV8 351 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 REXO5Q96IC2 774 aaKnown RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 EGLN2Q96KS0 407 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 APOLD1Q96LR9 279 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 OSBPL10Q9BXB5 764 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ATG10Q9H0Y0 220 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 LINC00597Q9H2U6 94 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 LIN28AQ9H9Z2 209 aaKnown RBP17.32■□□□□ 0.36
CLDN9-201ENST00000445369 PCDH12Q9NPG4 1184 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 TDP1Q9NUW8 608 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 USE1Q9NZ43 259 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 GPRC5BQ9NZH0 403 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 FADS2P1A8MWK0 482 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 PER2O15055 1255 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 FTH1P02794 183 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 GSNP06396 782 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 ETV3P41162 512 aa17.32■□□□□ 0.36
CLDN9-201ENST00000445369 HALP42357 657 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms