RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FUOMA2VDF0 154 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 SCN2BO60939 215 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 C22orf31O95567 290 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CSF2P04141 144 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 F8A1P23610 371 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 NUDT6P53370 316 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ARSFP54793 590 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 GRSF1Q12849 480 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CHIT1Q13231 466 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CDCA2Q69YH5 1023 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TREML1Q86YW5 311 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 DENND6BQ8NEG7 585 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 OR4C6Q8NH72 309 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TRIM43Q96BQ3 446 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 IL4I1Q96RQ9 567 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 MAPKAP1Q9BPZ7 522 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 DTLQ9NZJ0 730 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 PNLIPRP1P54315 467 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 CPNE8Q86YQ8 564 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TMC8Q8IU68 726 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 NTPCRQ9BSD7 190 aaKnown RBP18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TRPV4Q9HBA0 871 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TIGARQ9NQ88 270 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 RFPL2O75678 378 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 BRCC3P46736 316 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 GLUD2P49448 558 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 UBAP2Q5T6F2 1119 aaKnown RBP18.23■□□□□ 0.51
SHANK3-203ENST00000445220 MOB2Q70IA6 237 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 EBPLQ9BY08 206 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 A0A075B6Q4 140 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 A8MT66 165 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 M0R036 132 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TYROBPO43914 113 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 CLIC3O95833 236 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 L1CAMP32004 1257 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 CLK3P49761 638 aaKnown RBP18.23■□□□□ 0.51
SHANK3-203ENST00000445220 MED27Q6P2C8 311 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TIFABQ6ZNK6 161 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 THAP6Q8TBB0 222 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 S100PBPQ96BU1 408 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 DUSP26Q9BV47 211 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 OR7A10O76100 309 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 ESR1P03372 595 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 DSC2Q02487 901 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 CBFBQ13951 182 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 ZNF782Q6ZMW2 699 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-203ENST00000445220 RELL1Q8IUW5 271 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 ZSWIM3Q96MP5 696 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 CCDC106Q9BWC9 280 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 RANBP3Q9H6Z4 567 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TAS2R9Q9NYW1 312 aa18.23■□□□□ 0.51
SHANK3-203ENST00000445220 TBC1D3BA6NDS4 549 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 XKRYO14609 159 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 GABRDO14764 452 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 GATBO75879 557 aaKnown RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 YBEYP58557 167 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 NAE1Q13564 534 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 SRFBP1Q8NEF9 429 aaKnown RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 TTPALQ9BTX7 342 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 OR51V1Q9H2C8 321 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 ISM1B1AKI9 464 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CCL22O00626 93 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 TSPAN1O60635 241 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 MT-CYBP00156 380 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 RHOQP17081 205 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 NPY5RQ15761 445 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CCBE1Q6UXH8 406 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 SYVN1Q86TM6 617 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 NEK7Q8TDX7 302 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 SMG7Q92540 1137 aaKnown RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 MYOCOSA0A1B0GUC4 107 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CD2P06729 351 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 PPP3R1P63098 170 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 KIAA1614Q5VZ46 1190 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 SLC9A6Q92581 669 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CDADC1Q9BWV3 514 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 COQ4Q9Y3A0 265 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 A0A1W2PP18 115 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 HTR3EA5X5Y0 456 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 DLX3O60479 287 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 SLC35G4P0C7Q5 338 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 DNAJB1P25685 340 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 MPP2Q14168 576 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 KCNJ11Q14654 390 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 CRB2Q5IJ48 1285 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 RAVER1Q8IY67 606 aaKnown RBP18.22■□□□□ 0.51
SHANK3-203ENST00000445220 PYROXD2Q8N2H3 581 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 MUS81Q96NY9 551 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 ATG10Q9H0Y0 220 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 COL20A1Q9P218 1284 aa18.22■□□□□ 0.51
SHANK3-203ENST00000445220 HMGN1P05114 100 aa18.21■□□□□ 0.51
SHANK3-203ENST00000445220 TFAP2BQ92481 460 aa18.21■□□□□ 0.51
SHANK3-203ENST00000445220 EXOSC8Q96B26 276 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms