RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 HMG20AQ9NP66 347 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SMPD3Q9NY59 655 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 CXXC1Q9P0U4 656 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 H3BSA7 217 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 PCDHGA12O60330 932 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 NME6O75414 186 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 IFNW1P05000 195 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 POLR2CP19387 275 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 PRAMEF14Q5SWL7 426 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SETD6Q8TBK2 473 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 THAP3Q8WTV1 239 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 TMBIM1Q969X1 311 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 CHIAQ9BZP6 476 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 WDR26Q9H7D7 661 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 A0A1B0GVT2 93 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 H0YGN5 161 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 EIF1AYO14602 144 aaKnown RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 LEFTY1O75610 366 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ARSDP51689 593 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 LMAN2Q12907 356 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 DLG1Q12959 904 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 FRRS1Q6ZNA5 592 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 LRRTM3Q86VH5 581 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 DPYSL5Q9BPU6 564 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 BOCQ9BWV1 1114 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.82□□□□□ -1.16
RIF1-205ENST00000444746 COMMD3Q9UBI1 195 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SLCO3A1Q9UIG8 710 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 NFS1Q9Y697 457 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 CCDC182A6NF36 153 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 PDPK1O15530 556 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 NPHS1O60500 1241 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 RLN1P04808 185 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 CDH1P12830 882 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 TDRPQ86YL5 185 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 CHST4Q8NCG5 386 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 HAPLN3Q96S86 360 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 IFT27Q9BW83 186 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 MANBAO00462 879 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 RGS10O43665 173 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 NSG1P42857 185 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 PXNP49023 591 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 NDUFAF6Q330K2 333 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 MZT2AQ6P582 158 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 NPWQ8N729 165 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 MACROD1Q9BQ69 325 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 TMEM109Q9BVC6 243 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TDP1Q9NUW8 608 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 KIF1AQ12756 1690 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ANKRD66B4E2M5 251 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 RTCAO00442 366 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 QPRTQ15274 297 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 MLIPQ5VWP3 458 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ZNF544Q6NX49 715 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 DEPDC4Q8N2C3 294 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 OR2AP1Q8NGE2 309 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 PXYLP1Q8TE99 480 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TIFAQ96CG3 184 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 MRPL48Q96GC5 212 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 SPATA5L1Q9BVQ7 753 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ADAM7Q9H2U9 754 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 USP29Q9HBJ7 922 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ZDHHC3Q9NYG2 299 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 SUCOQ9UBS9 1254 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 WBP11Q9Y2W2 641 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 KDELR3O43731 214 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 VARSP26640 1264 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 EIF2B5Q13144 721 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 DRICH1Q6PGQ1 229 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 LRRC58Q96CX6 371 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 IL12RB2Q99665 862 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TMEM27Q9HBJ8 222 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 FBXL12Q9NXK8 326 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 C3P01024 1663 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 QSOX1O00391 747 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 UGT2B11O75310 529 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 CCT3P49368 545 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 RPS3AP61247 264 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 FAM189BP81408 668 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.16
RIF1-205ENST00000444746 HYAL4Q2M3T9 481 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 IDNKQ5T6J7 187 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 PGBD2Q6P3X8 592 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 OR4N5Q8IXE1 308 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ZDHHC14Q8IZN3 488 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 KCTD13Q8WZ19 329 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 MRGPRX2Q96LB1 330 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 TFB2MQ9H5Q4 396 aaKnown RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 AKAP7Q9P0M2 348 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 ZNF865P0CJ78 1059 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 GIMD1P0DJR0 217 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 FGF3P11487 239 aaPredicted RBP7.81□□□□□ -1.16
RIF1-205ENST00000444746 ELK4P28324 431 aa7.81□□□□□ -1.16
RIF1-205ENST00000444746 MASP1P48740 699 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms