RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 LIASO43766 372 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CTSVO60911 334 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 IPO7O95373 1038 aaKnown RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 S1PR4O95977 384 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 FDFT1P37268 417 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CSE1LP55060 971 aaKnown RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 SF1Q15637 639 aaKnown RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CYP2A13Q16696 494 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 FAM214AQ32MH5 1076 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 FASTKD1Q53R41 847 aaKnown RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 TCTE1Q5JU00 501 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 AGAP7PQ5VUJ5 663 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 FBXO42Q6P3S6 717 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 AFTPHQ6ULP2 937 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 UNC5DQ6UXZ4 953 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 COX15Q7KZN9 410 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 LDB1Q86U70 411 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 SYCE1Q8N0S2 351 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CFAP61Q8NHU2 1237 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 DNAJB14Q8TBM8 379 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 LKAAEAR1Q8TD35 194 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 ATG4AQ8WYN0 398 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 PEX13Q92968 403 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 AGAP4Q96P64 663 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 IL17FQ96PD4 163 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 LMF1Q96S06 567 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 SPSB2Q99619 263 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 P2RY12Q9H244 342 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 SLC6A20Q9NP91 592 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CUTCQ9NTM9 273 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CIDEBQ9UHD4 219 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 FBXL4Q9UKA2 621 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 CSAG2Q9Y5P2 127 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 HS3ST3B1Q9Y662 390 aa9.73□□□□□ -0.85
HDLBP-219ENST00000442714 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 PRMT5O14744 637 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 RASGRF2O14827 1237 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 CD3EAPO15446 510 aaKnown RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 C1orf105O95561 183 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 FTCDO95954 541 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 GAS8O95995 478 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 RPN2P04844 631 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 APOA4P06727 396 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 ETS1P14921 441 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 MCM3P25205 808 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 ITGA3P26006 1051 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 PPARGP37231 505 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 DCTP40126 519 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 OR1D4P47884 311 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 Q0VFX4 171 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 KIF5AQ12840 1032 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 GRM7Q14831 915 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 HIF1AQ16665 826 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 WASHC2DQ5SRD0 308 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 ATG9BQ674R7 924 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 PRUNE1Q86TP1 453 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 TMEM139Q8IV31 216 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 ST6GALNAC3Q8NDV1 305 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 OR11G2Q8NGC1 345 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 OR2A1Q8NGT9 310 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 HMGCLL1Q8TB92 370 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 UBE2Q2Q8WVN8 375 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 C5orf34Q96MH7 638 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 WDR77Q9BQA1 342 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 MESP1Q9BRJ9 268 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 FRMD8P1Q9BZ68 369 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 LHPPQ9H008 270 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 AGPAT4Q9NRZ5 378 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 INTS7Q9NVH2 962 aaKnown RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 MARCH4Q9P2E8 410 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-219ENST00000442714 CDC23Q9UJX2 597 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 TCAF1Q9Y4C2 921 aa9.72□□□□□ -0.85
HDLBP-219ENST00000442714 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.85
HDLBP-219ENST00000442714 PIKFYVEQ9Y2I7 2098 aa9.71□□□□□ -0.85
HDLBP-219ENST00000442714 CACNA1DQ01668 2161 aa9.71□□□□□ -0.85
HDLBP-219ENST00000442714 LOC105369274A0A096LPK9 316 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 LOC102723532A0A0G2JNH3 316 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 A0A1W2PPV9 198 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 HYKKA2RU49 373 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 ALOX12BO75342 701 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 KLHL18O94889 574 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 FKBP9O95302 570 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 MED26O95402 600 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 IFNB1P01574 187 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 RPL22P35268 128 aaKnown RBP9.71□□□□□ -0.86
HDLBP-219ENST00000442714 TSFMP43897 325 aaKnown RBP9.71□□□□□ -0.86
HDLBP-219ENST00000442714 YBX1P67809 324 aaKnown RBP9.71□□□□□ -0.86
HDLBP-219ENST00000442714 CCSMST1Q4G0I0 132 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 PCID2Q5JVF3 399 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 TTC23LQ6PF05 361 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 PPP1R21Q6ZMI0 780 aa9.71□□□□□ -0.86
HDLBP-219ENST00000442714 SHISA6Q6ZSJ9 500 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms