RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 LCN8Q6JVE9 175 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 AMZ2Q86W34 360 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 DHFR2Q86XF0 187 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 AQP12AQ8IXF9 295 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 CFAP206Q8IYR0 622 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 LILRA3Q8N6C8 439 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 OR8J3Q8NGG0 315 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 OR9A1PQ8NGU1 263 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 ZUFSPQ96AP4 578 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 VPS33AQ96AX1 596 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 MSANTD3Q96H12 275 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 TEX37Q96LM6 180 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 EFCAB11Q9BUY7 163 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 TEX101Q9BY14 249 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 VCXQ9H320 206 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 EHD1Q9H4M9 534 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 ACTL8Q9H568 366 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 CLMPQ9H6B4 373 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 C8orf33Q9H7E9 229 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 RMI1Q9H9A7 625 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 PREBQ9HCU5 417 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 FARSBQ9NSD9 589 aaKnown RBP12.79□□□□□ -0.36
CPSF4-206ENST00000441580 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 PCDHGA11Q9Y5H2 935 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 PCDHA9Q9Y5H5 950 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 KCNE2Q9Y6J6 123 aa12.79□□□□□ -0.36
CPSF4-206ENST00000441580 PRSS51A0A1B0GVH4 220 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 E7EQ34 232 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 K7EQS6 105 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 KMOO15229 486 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 KCNH1O95259 989 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 HOXB2P14652 356 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 DRD1P21728 446 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 KELP23276 732 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 PDHA2P29803 388 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 HSD17B2P37059 387 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 CASP2P42575 452 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 HNRNPFP52597 415 aaKnown RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 SEC13P55735 322 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 PHEXP78562 749 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 MS4A2Q01362 244 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 RHDQ02161 417 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 DMPKQ09013 629 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 PWP1Q13610 501 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 MAP7Q14244 749 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ARHGAP19Q14CB8 494 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TRIP10Q15642 601 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ZXDCQ2QGD7 858 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 WSCD2Q2TBF2 565 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 PLA2G4EQ3MJ16 856 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 AASDHQ4L235 1098 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 USP39Q53GS9 565 aaKnown RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 OGFRL1Q5TC84 451 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TLDC1Q6P9B6 456 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 LPCAT2Q7L5N7 544 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 C11orf96Q7Z7L8 435 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 CACUL1Q86Y37 369 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 SLC15A3Q8IY34 581 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 SYTL1Q8IYJ3 562 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TESCQ96BS2 214 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 WDR34Q96EX3 536 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 KCTD14Q9BQ13 255 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TIMM29Q9BSF4 260 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 SGPP1Q9BX95 441 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 KLHL4Q9C0H6 718 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 OR52A5Q9H2C5 316 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ALG2Q9H553 416 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 IL1RL2Q9HB29 575 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 GULP1Q9UBP9 304 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
CPSF4-206ENST00000441580 TMEM265A0A087WTH1 108 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 KCNJ13O60928 360 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 MYO1DO94832 1006 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SLC35G4P0C7Q5 338 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 BCKDHAP12694 445 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 ACADLP28330 430 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SLC7A1P30825 629 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 CLDN8P56748 225 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 C21orf58P58505 322 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms