RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 CADM2Q8N3J6 435 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 AADATQ8N5Z0 425 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 WRAP53Q9BUR4 548 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 PSME2Q9UL46 239 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 H3BSA7 217 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 CKMT2P17540 419 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GRM5P41594 1212 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 FHITP49789 147 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 QPRTQ15274 297 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 PLEKHG4Q58EX7 1191 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 TRIM40Q6P9F5 258 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SLCO6A1Q86UG4 719 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MCATQ8IVS2 390 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 AMER2Q8N7J2 671 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 ZFP28Q8NHY6 868 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 PTPN18Q99952 460 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 TGIF2Q9GZN2 237 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GOLGA2P5Q9HBQ8 144 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 TNPO3Q9Y5L0 923 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 UBE2QL1A1L167 161 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 C12orf71A8MTZ7 269 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GPR25O00155 361 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 IRF9Q00978 393 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF460Q14592 562 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF248Q8NDW4 579 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 CENPNQ96H22 339 aaPredicted RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GLOD4Q9HC38 313 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 RSL1D1O76021 490 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 GABRR2P28476 465 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 SF1Q15637 639 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZDHHC14Q8IZN3 488 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TSEN15Q8WW01 171 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF566Q969W8 418 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TMLHEQ9NVH6 421 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF282Q9UDV7 671 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 AGO1Q9UL18 857 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TBC1D30Q9Y2I9 924 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 CACNB4O00305 520 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 RFXANKO14593 260 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NMBRP28336 390 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 IL23RQ5VWK5 629 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PAOXQ6QHF9 649 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 RALGPS2Q86X27 583 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 CPSF7Q8N684 471 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PAPD5Q8NDF8 572 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 RSC1A1Q92681 617 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 MED30Q96HR3 178 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NUDT9Q9BW91 350 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 MAGEL2Q9UJ55 1249 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ALG5Q9Y673 324 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 LDB1Q86U70 411 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 SCPEP1Q9HB40 452 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 G3V2T6 193 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TFECO14948 347 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 RLN1P04808 185 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NR4A1P22736 598 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 HTR1BP28222 390 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 RORAP35398 523 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF155Q12901 538 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 CIR1Q86X95 450 aaPredicted RBP11.36□□□□□ -0.59
CCBE1-202ENST00000439986 OR2L5Q8NG80 312 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PPCDCQ96CD2 204 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 GBA3Q9H227 469 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TBCCD1Q9NVR7 557 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ACSL6Q9UKU0 697 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 MAP4K5Q9Y4K4 846 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 A0A1W2PQ67 120 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NPIPA2E9PIF3 369 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 CXCR2P25025 360 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 IGFALSP35858 605 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 SLC26A3P40879 764 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 TTPAP49638 278 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 SCGB2A2Q13296 93 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 BTBD16Q32M84 506 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PAGE2Q7Z2X7 111 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 PRSS58Q8IYP2 241 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 NKD1Q969G9 470 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 LAMP5Q9UJQ1 280 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
CCBE1-202ENST00000439986 SAGE2PA6NJ88 616 aa11.35□□□□□ -0.59
CCBE1-202ENST00000439986 C6P13671 934 aa11.35□□□□□ -0.59
CCBE1-202ENST00000439986 ANXA8P13928 327 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms