RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 C19orf47Q8N9M1 422 aaKnown RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 ZNF480Q8WV37 535 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 SMPDL3AQ92484 453 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 CCDC138Q96M89 665 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 TRIM54Q9BYV2 358 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 SPRY4Q9C004 299 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 FGF21Q9NSA1 209 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 ADAMTS6Q9UKP5 1117 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 NOVA2Q9UNW9 492 aaKnown RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 PDE10AQ9Y233 779 aa11.4□□□□□ -0.58
HSPG2-206ENST00000439717 TMEM184BQ9Y519 407 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-206ENST00000439717 A0A1W2PPV9 198 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 KRT87PA6NCN2 255 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 PABPN1LA6NDY0 278 aaKnown RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 TARM1B6A8C7 271 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 STK17BO94768 372 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 WISP3O95389 354 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 ACSL3O95573 720 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 SLC16A8O95907 504 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 HIST1H2AGP0C0S8 130 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 PVRP15151 417 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 STMN1P16949 149 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 HIST1H2ADP20671 130 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 TNFRSF8P28908 595 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 AP1S2P56377 157 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 CLN3Q13286 438 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 MAP7Q14244 749 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 FASTKQ14296 549 aaKnown RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 EFTUD2Q15029 972 aaKnown RBP eCLIP11.39□□□□□ -0.592e-8■■■■□ 24.2
HSPG2-206ENST00000439717 ZKSCAN8Q15776 578 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 BROXQ5VW32 411 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 TRMT10CQ7L0Y3 403 aaKnown RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 TRIM73Q86UV7 250 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 TAX1BP1Q86VP1 789 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 ZFAND4Q86XD8 727 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 CEP97Q8IW35 865 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 SYTL1Q8IYJ3 562 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 OR2A1Q8NGT9 310 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 DLG3Q92796 817 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 ZUFSPQ96AP4 578 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF501Q96CX3 271 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-206ENST00000439717 HIST1H2AHQ96KK5 128 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 HIST1H2AJQ99878 128 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 H2AFJQ9BTM1 129 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 PILRAQ9UKJ1 303 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 KLK4Q9Y5K2 254 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 ADAMTS20P59510 1910 aa11.39□□□□□ -0.59
HSPG2-206ENST00000439717 A0A087WUV0 522 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 E7ENX8 843 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 KLK10O43240 276 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 FAM155BO75949 473 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CCNDBP1O95273 360 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 SLU7O95391 586 aaKnown RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 DLGAP3O95886 979 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ABHD2P08910 425 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CRABP2P29373 138 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CMPK1P30085 196 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 RPA3P35244 121 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ATP1A2P50993 1020 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 PGGT1BP53609 377 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 UCNP55089 124 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 RAB10P61026 200 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 TAP2Q03519 686 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF460Q14592 562 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 GPR19Q15760 415 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ZIC1Q15915 447 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 KIAA1614Q5VZ46 1190 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CDHR3Q6ZTQ4 885 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 LRRC56Q8IYG6 542 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 OR2L3Q8NG85 312 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ANKRD49Q8WVL7 239 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ATL1Q8WXF7 558 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 NAF1Q96HR8 494 aaKnown RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ULBP3Q9BZM4 244 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 DERL2Q9GZP9 239 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 KLHL25Q9H0H3 589 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 PCBD2Q9H0N5 130 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 CAB39LQ9H9S4 337 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 STOX2Q9P2F5 926 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-206ENST00000439717 ANKMY1Q9P2S6 941 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 SERTAD3Q9UJW9 196 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 IGF2RP11717 2491 aa11.38□□□□□ -0.59
HSPG2-206ENST00000439717 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 RAD1O60671 282 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 MT-ND3P03897 115 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 INHBAP08476 426 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 CCDC166P0CW27 439 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 MAGP20916 626 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 CCND1P24385 295 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 IMPA1P29218 277 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 SLC26A3P40879 764 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 GRIA3P42263 894 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms