RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 DGKQP52824 942 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 MVKQ03426 396 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 SPATC1Q76KD6 591 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 GPR65Q8IYL9 337 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ASCC1Q8N9N2 400 aaKnown RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 ZNF540Q8NDQ6 660 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ZBTB20Q9HC78 741 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 CNGB3Q9NQW8 809 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ZNF225Q9UK10 706 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 NEU3Q9UQ49 428 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 NEUROG3Q9Y4Z2 214 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 U3KQV3 271 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 HAT1O14929 419 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 KMOO15229 486 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 DFNA5O60443 496 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 KERAO60938 352 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 RPS17P08708 135 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SLC2A3P11169 496 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 UGT2B10P36537 528 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PNPLA4P41247 253 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 LILRA4P59901 499 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CXCR4P61073 352 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 TFF2Q03403 129 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 KRR1Q13601 381 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SIM2Q14190 667 aaPredicted RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 RBBP7Q16576 425 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 TPRG1LQ5T0D9 272 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 ATAD3CQ5T2N8 411 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 HIPK1Q86Z02 1210 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 ZNF548Q8NEK5 533 aaPredicted RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 OR10A6Q8NH74 314 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PYCR2Q96C36 320 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 SNX18Q96RF0 628 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 RIBC2Q9H4K1 309 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CCDC177Q9NQR7 707 aaPredicted RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 NUDT5Q9UKK9 219 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 KCTD3Q9Y597 815 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 OR2A25A4D2G3 310 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 GABRDO14764 452 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 TEX28O15482 410 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 FAM20BO75063 409 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 B3GAT3O94766 335 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 LCKP06239 509 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CYP4B1P13584 511 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 IGFBP5P24593 272 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 SUOXP51687 545 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 ZNF45Q02386 682 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 GBX1Q14549 363 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PLA2G4EQ3MJ16 856 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 SV2CQ496J9 727 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 LILRA6Q6PI73 481 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 TAC4Q86UU9 113 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 MICU2Q8IYU8 434 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PARP16Q8N5Y8 322 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 STAG3L4Q8TBR4 150 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 KIAA1191Q96A73 305 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 SMOQ99835 787 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 S1PR5Q9H228 398 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 DDX28Q9NUL7 540 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 VAPAQ9P0L0 249 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 FNIP2Q9P278 1114 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 MROH6A6NGR9 719 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CXCR6O00574 342 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 ECI2O75521 394 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CXCL14O95715 111 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PRKCAP17252 672 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CLK3P49761 638 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 AGTR2P50052 363 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 RACK1P63244 317 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SMN1Q16637 294 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 TIGD7Q6NT04 549 aaPredicted RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SLC38A4Q969I6 547 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 THUMPD3Q9BV44 507 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SLC25A51Q9H1U9 297 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 CCNB1IP1Q9NPC3 277 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 NPAP1Q9NZP6 1156 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 IKZF3Q9UKT9 509 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 PKP3Q9Y446 797 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 HCFC2Q9Y5Z7 792 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 COL4A2P08572 1712 aa8.36□□□□□ -1.07
HPS4-206ENST00000439453 HELZP42694 1942 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 NYNRINQ9P2P1 1898 aaKnown RBP8.36□□□□□ -1.07
HPS4-206ENST00000439453 SCELO95171 688 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PGLSO95336 258 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 DBTP11182 482 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 G6PDP11413 515 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 EPCAMP16422 314 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 MSH3P20585 1137 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 GGT5P36269 586 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 KRT6CP48668 564 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 MRPS15P82914 257 aaKnown RBP8.35□□□□□ -1.07
HPS4-206ENST00000439453 IL1RL1Q01638 556 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CHRNEQ04844 493 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 PRKCDQ05655 676 aa8.35□□□□□ -1.07
HPS4-206ENST00000439453 CYP4F3Q08477 520 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms