RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C1orf105O95561 183 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 ALPPP05187 535 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 FMO4P31512 558 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 GRIA3P42263 894 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 BDKRB1P46663 353 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 GPS1Q13098 491 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 TCTE1Q5JU00 501 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 TTC29Q8NA56 475 aaPredicted RBP17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 SELENOSQ9BQE4 189 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 SOX13Q9UN79 622 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 RUVBL2Q9Y230 463 aaKnown RBP17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 NFS1Q9Y697 457 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 FER1L5A0AVI2 2057 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 HECTD1Q9ULT8 2610 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 E5RI56 91 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 CHRM3P20309 590 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 GRM7Q14831 915 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 CTSL3PQ5NE16 218 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 VWA5B1Q5TIE3 1220 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 JMJD6Q6NYC1 403 aaPredicted RBP17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 GALNT11Q8NCW6 608 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 FAM136AQ96C01 138 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 TCF12Q99081 682 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 P4HTMQ9NXG6 502 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 LUZP4Q9P127 313 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 VPS9D1Q9Y2B5 631 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 CRYL1Q9Y2S2 319 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 FAM169AQ9Y6X4 670 aa17.71■□□□□ 0.43
AC004540.1-201ENST00000439120 SPENQ96T58 3664 aaKnown RBP17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 SEC16AO15027 2179 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 COL12A1Q99715 3063 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 TCRBV7S3A2A0A539 114 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 TARM1B6A8C7 271 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 DSCR3O14972 297 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 NIPSNAP2O75323 286 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 SORBS2O94875 1100 aaKnown RBP17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 ESR1P03372 595 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 ARNTP27540 789 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 TYSND1Q2T9J0 566 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 DCAF10Q5QP82 559 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 FCRL6Q6DN72 434 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 KIAA0930Q6ICG6 404 aaPredicted RBP17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 MRPL14Q6P1L8 145 aaKnown RBP17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 GALNT16Q8N428 558 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 PRELID2Q8N945 189 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 LPGAT1Q92604 370 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 ZUFSPQ96AP4 578 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 FKBP10Q96AY3 582 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 SMAD5Q99717 465 aaKnown RBP17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 MIPEPQ99797 713 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 CUTCQ9NTM9 273 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 SPATA7Q9P0W8 599 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 C5AR2Q9P296 337 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 PPP2R2CQ9Y2T4 447 aa17.7■□□□□ 0.42
AC004540.1-201ENST00000439120 CCDC88CQ9P219 2028 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 KRT14P02533 472 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 OGNP20774 298 aaKnown RBP17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 MCM3P25205 808 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 VARSP26640 1264 aaKnown RBP17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 PSMB5P28074 263 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 ATP5DP30049 168 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 KCNJ11Q14654 390 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 NAA25Q14CX7 972 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 KCTD19Q17RG1 926 aaPredicted RBP17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 FAM214AQ32MH5 1076 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 CCSMST1Q4G0I0 132 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 ARMC3Q5W041 872 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 SLC6A19Q695T7 634 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 TM9SF4Q92544 642 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 COL26A1Q96A83 441 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 PNPLA2Q96AD5 504 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 BIRC8Q96P09 236 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 MAP4K5Q9Y4K4 846 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 NBASA2RRP1 2371 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 RELNP78509 3460 aa17.69■□□□□ 0.42
AC004540.1-201ENST00000439120 FLNCQ14315 2725 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CTAGE9A4FU28 777 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CLEC18AA5D8T8 446 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 SRPX2O60687 465 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CNOT3O75175 753 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 AVILO75366 819 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 IPO13O94829 963 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 UMODP07911 640 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 ERVK-10P10266 1014 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 GNLYP22749 145 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CMPK1P30085 196 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 UQCRFS1P47985 274 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 ADARP55265 1226 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 FOXL2P58012 376 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 VSX2P58304 361 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 THOC5Q13769 683 aaKnown RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 MYBPC3Q14896 1274 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 INPP5JQ15735 1006 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 NEPROQ6NW34 567 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 CLEC18BQ6UXF7 455 aa17.68■□□□□ 0.42
AC004540.1-201ENST00000439120 OVCH1Q7RTY7 1134 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms