RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 SLC35F4A4IF30 521 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 E9PLN8 166 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 KIF5CO60282 957 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 SLC4A1P02730 911 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 PIRTP0C851 137 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 PBLDP30039 288 aaPredicted RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 CARSP49589 748 aaKnown RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 NAP1L1P55209 391 aaKnown RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 SRSF11Q05519 484 aaKnown RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 HADHQ16836 314 aaKnown RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 FNBP1LQ5T0N5 605 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 CCDC70Q6NSX1 233 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 SPESP1Q6UW49 350 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 CXXC5Q7LFL8 322 aaKnown RBP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 AMIGO1Q86WK6 493 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 LRRC57Q8N9N7 239 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 DDHD1Q8NEL9 900 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 HSPH1Q92598 858 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 SDCCAG3Q96C92 435 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 GPR137Q96N19 417 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 FERD3LQ96RJ6 166 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 TRIB3Q96RU7 358 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 ZNF160Q9HCG1 818 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.68□□□□□ -0.7
CSTF3-203ENST00000438862 IRAK4Q9NWZ3 460 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 ACTR10Q9NZ32 417 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 ALG6Q9Y672 507 aa10.68□□□□□ -0.7
CSTF3-203ENST00000438862 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 HCFC1P51610 2035 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 A0A1B0GX78 115 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 MACROD2A1Z1Q3 448 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 KIF2AO00139 706 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 HCRTR1O43613 425 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 BMP10O95393 424 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 PRAMEF1O95521 474 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 MT-CYBP00156 380 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 PRR35P0CG20 571 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 RARAP10276 462 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 ACPPP15309 386 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 IL1R2P27930 398 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 HMGCLP35914 325 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 ADAM8P78325 824 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 DEFB110Q30KQ9 67 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 TTLL10Q6ZVT0 673 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 DAAM2Q86T65 1068 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 FAM20CQ8IXL6 584 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 DMRTC2Q8IXT2 367 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 CFAP206Q8IYR0 622 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 ADGRF3Q8IZF5 1079 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 NRGNQ92686 78 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 RBM41Q96IZ5 413 aaKnown RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 LINC00615Q96LM1 132 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 RMDN2Q96LZ7 410 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 PCDH18Q9HCL0 1135 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 BPIFA1Q9NP55 256 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 IL26Q9NPH9 171 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 TRMT1Q9NXH9 659 aaKnown RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 ST6GALNAC2Q9UJ37 374 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 PLCL2Q9UPR0 1127 aa10.67□□□□□ -0.7
CSTF3-203ENST00000438862 FLNAP21333 2647 aaKnown RBP10.67□□□□□ -0.7
CSTF3-203ENST00000438862 NSG1A0A0A6YYJ2 146 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 GRID2IPA4D2P6 1211 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 OR5H15A6NDH6 313 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 MAP2K7O14733 419 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 UGT1A9O60656 530 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 ZWINTO95229 277 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 WDPCPO95876 746 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 SERPINA7P05543 415 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 POLBP06746 335 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 UQCRHP07919 91 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 UGT1A6P19224 532 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 MSH3P20585 1137 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 UGT1A1P22309 533 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 NSG1P42857 185 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 AP2B1P63010 937 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 TMPRSS15P98073 1019 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 ITGA9Q13797 1035 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 MESDQ14696 234 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 PAFAH1B3Q15102 231 aaKnown RBP10.66□□□□□ -0.7
CSTF3-203ENST00000438862 CEBPEQ15744 281 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 ZIC1Q15915 447 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 PPP2R5EQ16537 467 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 GPRC6AQ5T6X5 926 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 YOD1Q5VVQ6 348 aaPredicted RBP10.66□□□□□ -0.7
CSTF3-203ENST00000438862 ATG9BQ674R7 924 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 RIPOR1Q6ZS17 1223 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 NDUFAF7Q7L592 441 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 VSIG1Q86XK7 387 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 PRIMA1Q86XR5 153 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 DNAJC22Q8N4W6 341 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 OR52E1Q8NGJ3 308 aa10.66□□□□□ -0.7
CSTF3-203ENST00000438862 AGAP11Q8TF27 550 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms