RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PHKG1Q16816 387 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 HYAL4Q2M3T9 481 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 UGT3A2Q3SY77 523 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 KRBOX4Q5JUW0 171 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 Q6ZTC4 211 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 C11orf57Q6ZUT1 292 aaPredicted RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 USP43Q70EL4 1123 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ARHGAP22Q7Z5H3 698 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 EGFL6Q8IUX8 553 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 IQUBQ8NA54 791 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ZBTB8BQ8NAP8 495 aaPredicted RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 TRIM58Q8NG06 486 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 KIF18AQ8NI77 898 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM76AQ8TAV0 307 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ANP32BQ92688 251 aaKnown RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 EXT2Q93063 718 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 RMDN2Q96LZ7 410 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ZMAT2Q96NC0 199 aaKnown RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF558Q96NG5 402 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 FNBP1Q96RU3 617 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM49AQ9H0Q0 323 aaPredicted RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ZWILCHQ9H900 591 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 Q9N2K0 584 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 A4GALTQ9NPC4 353 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 SIX2Q9NPC8 291 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 C2orf42Q9NWW7 574 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 TXNDC16Q9P2K2 825 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 GIMAP2Q9UG22 337 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 DAPK2Q9UIK4 370 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ANAPC5Q9UJX4 755 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 GRID1Q9ULK0 1009 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ISY1Q9ULR0 285 aaKnown RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 SMCHD1A6NHR9 2005 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 PRR23AA6NEV1 266 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 CCDC188H7C350 402 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 WDR46O15213 610 aaKnown RBP3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SLC22A2O15244 555 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 DFFBO76075 338 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SLCO2B1O94956 709 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SCG2P13521 617 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 CDH3P22223 829 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 PTAFRP25105 342 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 MPZP25189 248 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 PTGER4P35408 488 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 KRT83P78385 493 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 HYAL1Q12794 435 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 GPR17Q13304 367 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 VEZF1Q14119 521 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SLC35D3Q5M8T2 416 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SH2D5Q6ZV89 423 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 NUP54Q7Z3B4 507 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 TLK2Q86UE8 772 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 LSMEM2Q8N112 164 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF383Q8NA42 475 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 OR52N5Q8NH56 324 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SETD6Q8TBK2 473 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SUSD6Q92537 303 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 LGALS12Q96DT0 336 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SIPA1Q96FS4 1042 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 CDHR1Q96JP9 859 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 MUS81Q96NY9 551 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 GBP5Q96PP8 586 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 PRRG4Q9BZD6 226 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 EDEM3Q9BZQ6 932 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 CHST11Q9NPF2 352 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SLC52A3Q9NQ40 469 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 SNX7Q9UNH6 387 aa3.43□□□□□ -1.86
LSM1P1-201ENST00000438629 ANXA2P2A6NMY6 339 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ENO4A6NNW6 628 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ERVV-2B6SEH9 535 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 O00370 1275 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 PSMD14O00487 310 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ARPC2O15144 300 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 LUC7L3O95232 432 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 AMBPP02760 352 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 CSN3P07498 182 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TSPY3P0CV98 308 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TSPY8P0CW00 308 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 IGHV4-31P0DP07 118 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 EPCAMP16422 314 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 CD22P20273 847 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 JAK1P23458 1154 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 CSTF2P33240 577 aaKnown RBP eCLIP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 RPL21P46778 160 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 IRX3P78415 501 aaPredicted RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TSPY1Q01534 308 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 KRTAP1-1Q07627 177 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF273Q14593 569 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 RRS1Q15050 365 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF876PQ49A33 203 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TTC31Q49AM3 519 aaPredicted RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 PHLDA2Q53GA4 152 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TCTE1Q5JU00 501 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 C6orf136Q5SQH8 315 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 SPOUT1Q5T280 376 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 VSIG1Q86XK7 387 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms