RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ICKQ9UPZ9 632 aa7.49□□□□□ -1.21
VPS50-204ENST00000438395 B3GNT3Q9Y2A9 372 aa7.49□□□□□ -1.21
VPS50-204ENST00000438395 EPN1Q9Y6I3 576 aaPredicted RBP7.49□□□□□ -1.21
VPS50-204ENST00000438395 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 A1L4Q6 167 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 HEATR9A2RTY3 570 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ERI2A8K979 691 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 MSTNO14793 375 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 DDAH2O95865 285 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 IFNB1P01574 187 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PROCP04070 461 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 APOA4P06727 396 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 UQCRHP07919 91 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PIM1P11309 404 aaPredicted RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 ITGAXP20702 1163 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ALAS2P22557 587 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ITGA3P26006 1051 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 CSE1LP55060 971 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 KIF5AQ12840 1032 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 CDH17Q12864 832 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 SSPNQ14714 243 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 MYBPC3Q14896 1274 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 SLC9A5Q14940 896 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 SLC5A12Q1EHB4 618 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 NKAIN1Q4KMZ8 207 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 CCDC38Q502W7 563 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PRR30Q53SZ7 412 aaPredicted RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 DNAJC21Q5F1R6 531 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 ZNF789Q5FWF6 425 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 DCAF10Q5QP82 559 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 RHBDD2Q6NTF9 364 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PACS1Q6VY07 963 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 DCUN1D3Q8IWE4 304 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PIANPQ8IYJ0 282 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 GALNT16Q8N428 558 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ZBTB2Q8N680 514 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 OTUD6BQ8N6M0 293 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 OR6P1Q8NGX9 317 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 OR5K2Q8NHB8 316 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ALG3Q92685 438 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 PTERQ96BW5 349 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 CDKN2AIPNLQ96HQ2 116 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 GBP5Q96PP8 586 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 SMAD5Q99717 465 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 TMEM121Q9BTD3 319 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 RAB11FIP5Q9BXF6 653 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 ZNF106Q9H2Y7 1883 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 P4HTMQ9NXG6 502 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 DHCR7Q9UBM7 475 aaKnown RBP7.48□□□□□ -1.21
VPS50-204ENST00000438395 ANAPC5Q9UJX4 755 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 SLC39A10Q9ULF5 831 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 CDYLQ9Y232 598 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 FAM169AQ9Y6X4 670 aa7.48□□□□□ -1.21
VPS50-204ENST00000438395 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 RELNP78509 3460 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 A0A1B0GX78 115 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CCDC162PA2VCL2 907 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 GRID2IPA4D2P6 1211 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 BTNL10A8MVZ5 291 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 GOLGA6L6A8MZA4 724 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 FTCDO95954 541 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 IGHA1P01876 353 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CAPN1P07384 714 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 PRSS56P0CW18 603 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CBSLP0DN79 551 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CBSP35520 551 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 FDFT1P37268 417 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 RAB28P51157 221 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 ARSFP54793 590 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 HSPA14Q0VDF9 509 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 MRPL49Q13405 166 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 ESPL1Q14674 2120 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 EIF2S3LQ2VIR3 472 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 FASTKD1Q53R41 847 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 ZC3H12BQ5HYM0 836 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 SEL1L2Q5TEA6 688 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 PTRHD1Q6GMV3 140 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 AADACL2Q6P093 401 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 NLRP9Q7RTR0 991 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 SYT9Q86SS6 491 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 TAX1BP1Q86VP1 789 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CCDC89Q8N998 374 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 TTC29Q8NA56 475 aaPredicted RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 PPHLN1Q8NEY8 458 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 CFAP61Q8NHU2 1237 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 ASZ1Q8WWH4 475 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 FKBP10Q96AY3 582 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 OR2A14Q96R47 310 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CHRNA10Q9GZZ6 450 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 SPRTNQ9H040 489 aaPredicted RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 MRM3Q9HC36 420 aaKnown RBP7.47□□□□□ -1.21
VPS50-204ENST00000438395 FAM60AQ9NP50 221 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 AGPAT4Q9NRZ5 378 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 SPHK1Q9NYA1 384 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 EURLQ9NYK6 297 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 CDC23Q9UJX2 597 aa7.47□□□□□ -1.21
VPS50-204ENST00000438395 NXT1Q9UKK6 140 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms