RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 AGPAT4Q9NRZ5 378 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 SPHK1Q9NYA1 384 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 EURLQ9NYK6 297 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 CDC23Q9UJX2 597 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 NXT1Q9UKK6 140 aaKnown RBP7.47□□□□□ -1.21
VPS50-203ENST00000436177 PLAGL1Q9UM63 463 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 MRFAP1Q9Y605 127 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 DUSP10Q9Y6W6 482 aa7.47□□□□□ -1.21
VPS50-203ENST00000436177 SEC16AO15027 2179 aa7.46□□□□□ -1.21
VPS50-203ENST00000436177 ANKUB1A6NFN9 424 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 MROH6A6NGR9 719 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 OR51F1A6NGY5 319 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 TCP11X1B4DZS4 312 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 PFDN6O15212 129 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 KRT86O43790 486 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 SEMA7AO75326 666 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 KLF7O75840 302 aaPredicted RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 METTL18O95568 372 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 GOT2P00505 430 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 ERVK-10P10266 1014 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 MAGP20916 626 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ACADLP28330 430 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 PKLRP30613 574 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 STIP1P31948 543 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 FOXN2P32314 431 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 TTPAP49638 278 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 PER3P56645 1201 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 AIMP2Q13155 320 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 GRM7Q14831 915 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 NAA25Q14CX7 972 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 SF1Q15637 639 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 ZIC1Q15915 447 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 RBBP7Q16576 425 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ZNF658BQ4V348 819 aaPredicted RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 TCTE1Q5JU00 501 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 RNFT1Q5M7Z0 435 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 AGAP7PQ5VUJ5 663 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 KCTD11Q693B1 232 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 UNC5DQ6UXZ4 953 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 NAPRTQ6XQN6 538 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 MAMDC2Q7Z304 686 aaPredicted RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 MCATQ8IVS2 390 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 SLC22A15Q8IZD6 547 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 CISD2Q8N5K1 135 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 RBMXL3Q8N7X1 1067 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 LRRC57Q8N9N7 239 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ACRBPQ8NEB7 543 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 OR52K1Q8NGK4 314 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 SLC35B2Q8TB61 432 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 COG1Q8WTW3 980 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ATG4AQ8WYN0 398 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 HDAC10Q969S8 669 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 NACC2Q96BF6 587 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 C5orf34Q96MH7 638 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 FOPNLQ96NB1 174 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 AGAP4Q96P64 663 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 NRTNQ99748 197 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 WDR77Q9BQA1 342 aaPredicted RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 FRMD8P1Q9BZ68 369 aaPredicted RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 EPS8L2Q9H6S3 715 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 RAB6BQ9NRW1 208 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 FBXL4Q9UKA2 621 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ZNF148Q9UQR1 794 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 COPG1Q9Y678 874 aaKnown RBP7.46□□□□□ -1.22
VPS50-203ENST00000436177 PRSS21Q9Y6M0 314 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 HIVEP3Q5T1R4 2406 aa7.46□□□□□ -1.22
VPS50-203ENST00000436177 ABCA12Q86UK0 2595 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 SLC5A10A0PJK1 596 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 AGPSO00116 658 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 PRMT5O14744 637 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 KPNA5O15131 536 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 OR1I1O60431 355 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 NDUFS3O75489 264 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 FKBP9O95302 570 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 APRTP07741 180 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 CD9P21926 228 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 MMP11P24347 488 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 ADRA1DP25100 572 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 GLRBP48167 497 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 ZNF75DP51815 510 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 GDF10P55107 478 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 RELBQ01201 579 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 OCA2Q04671 838 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 MSLNQ13421 630 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 TSTD2Q5T7W7 516 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 YOD1Q5VVQ6 348 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 ZNF385CQ66K41 422 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 OTOAQ7RTW8 1153 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 PPP1R32Q7Z5V6 425 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 KLHDC8BQ8IXV7 354 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 C2orf73Q8N5S3 287 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 Q8NA96 180 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 OR4L1Q8NH43 312 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 SNRNP40Q96DI7 357 aaKnown RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 CNDP1Q96KN2 507 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 PANX3Q96QZ0 392 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 BAG1Q99933 345 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 SELENOSQ9BQE4 189 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms