RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CREG1O75629 220 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TNNI3P19429 210 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 NRIP1P48552 1158 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 BTN1A1Q13410 526 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 QPRTQ15274 297 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SLC46A3Q7Z3Q1 461 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 CCDC190Q86UF4 302 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 OR10T2Q8NGX3 314 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 GDF15Q99988 308 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 MCCC2Q9HCC0 563 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 CCNB1IP1Q9NPC3 277 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 KLHL18O94889 574 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 NUDT1P36639 197 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 FAM189BP81408 668 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TSNQ15631 228 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 FAM174BQ3ZCQ3 159 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SETMARQ53H47 684 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 IL27RAQ6UWB1 636 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 C10orf111Q8N326 155 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 MTERF3Q96E29 417 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM209Q96SK2 561 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ZBTB18Q99592 522 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RBM22Q9NW64 420 aaKnown RBP eCLIP7.29□□□□□ -1.241e-9■□□□□ 8.7
CPSF6-202ENST00000435070 TRHDEQ9UKU6 1024 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 MAFBQ9Y5Q3 323 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF487B1APH4 448 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 B4DXG7 233 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SHOXO15266 292 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 FCER2P06734 321 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PRSS56P0CW18 603 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 TATDN3Q17R31 274 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 RFX4Q33E94 735 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PDZK1Q5T2W1 519 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 AGMOQ6ZNB7 445 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 FAM120BQ96EK7 910 aaKnown RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OR5M11Q96RB7 305 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PCYT2Q99447 389 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 C11orf84Q9BUA3 381 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 TRIM45Q9H8W5 580 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 IKZF3Q9UKT9 509 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 JUNDP17535 347 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 TIE1P35590 1138 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 UGT2B10P36537 528 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 BRCC3P46736 316 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CLCN5P51795 746 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SCN1BQ07699 218 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 LCP2Q13094 533 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MAPKAPK3Q16644 382 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PKDCCQ504Y2 493 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CPZQ66K79 652 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 NADSYN1Q6IA69 706 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 VN1R5Q7Z5H4 357 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 VTCN1Q7Z7D3 282 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 NLGN4YQ8NFZ3 816 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OR4M2Q8NGB6 313 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ASB15Q8WXK1 588 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 METTL2AQ96IZ6 378 aaKnown RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MAGEB10Q96LZ2 347 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SMURF1Q9HCE7 757 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 RAD18Q9NS91 495 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 NDFIP2Q9NV92 336 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MCUBQ9NWR8 336 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PIM2Q9P1W9 311 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CPA4Q9UI42 421 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZMYM5Q9UJ78 669 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MN1Q10571 1320 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 FADS2P1A8MWK0 482 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 STX7O15400 261 aaKnown RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 B3GALT4O96024 378 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 MTHFD2P13995 350 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SLC2A4P14672 509 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CLCN7P51798 805 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 AKAP1Q92667 903 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SLC22A4Q9H015 551 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 DEFB129Q9H1M3 183 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SP110Q9HB58 689 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 NUP50Q9UKX7 468 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SCML1Q9UN30 329 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 GREB1LQ9C091 1923 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CDC7O00311 574 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PER2O15055 1255 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 COL6A1P12109 1028 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 HCAR3P49019 387 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 RGS6P49758 472 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ELP6Q0PNE2 266 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 CDH18Q13634 790 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 PYDC2Q56P42 97 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 KHDRBS2Q5VWX1 349 aaKnown RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OTOP2Q7RTS6 562 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 SPATA19Q7Z5L4 167 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZFAND4Q86XD8 727 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZBTB44Q8NCP5 570 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF548Q8NEK5 533 aaPredicted RBP7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OR6C4Q8NGE1 309 aa7.28□□□□□ -1.24
CPSF6-202ENST00000435070 OR52B6Q8NGF0 335 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms