RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BMXP51813 675 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 TMTC4Q5T4D3 741 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 DHRSXQ8N5I4 330 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 SLC15A4Q8N697 577 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 OR2T12Q8NG77 320 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 TRIM54Q9BYV2 358 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 CD244Q9BZW8 370 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 GPRC5BQ9NZH0 403 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 NUDT4Q9NZJ9 180 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 PRKAG2Q9UGJ0 569 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 TBX21Q9UL17 535 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 PATJQ8NI35 1801 aa15.18■□□□□ 0.02
SCARF1-203ENST00000434376 hCG_2039718K7EN88 272 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 LSM1O15116 133 aaKnown RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 FZD6O60353 706 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 PRKD3O94806 890 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 LDLRP01130 860 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 OR56A5P0C7T3 313 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ELK4P28324 431 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CACHD1Q5VU97 1274 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TXNDC11Q6PKC3 985 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TPRG1Q6ZUI0 275 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 EPHX4Q8IUS5 362 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CFAP206Q8IYR0 622 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 SLC13A3Q8WWT9 602 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TPD52L3Q96J77 140 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CCDC138Q96M89 665 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 PAK6Q9NQU5 681 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM98Q9Y2Y6 226 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ALDH4A1P30038 563 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CORINQ9Y5Q5 1042 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 COL4A6Q14031 1691 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 AGRPO00253 132 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 RGS14O43566 566 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 PGRP06401 933 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 C1SP09871 688 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CDKN2CP42773 168 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 NSG1P42857 185 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ACADVLP49748 655 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 RCAN2Q14206 197 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ZXDCQ2QGD7 858 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM220Q6QAJ8 160 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ADGRG5Q8IZF4 528 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CLECL1Q8IZS7 167 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 IRF7Q92985 503 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 FAM120BQ96EK7 910 aaKnown RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 ZNF382Q96SR6 550 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 HOPXQ9BPY8 73 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM121BQ9BXQ6 578 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 MRPL40Q9NQ50 206 aaKnown RBP15.17■□□□□ 0.02
SCARF1-203ENST00000434376 SACM1LQ9NTJ5 587 aa15.17■□□□□ 0.02
SCARF1-203ENST00000434376 CAPN15O75808 1086 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 OPN1SWP03999 348 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 ELFN1P0C7U0 828 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 BCKDHAP12694 445 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 IL7RP16871 459 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 HOXB8P17481 243 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 BCAP31P51572 246 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 RGS21Q2M5E4 152 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 NHSL2Q5HYW2 709 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 FAM109BQ6ICB4 259 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 GDPD4Q6W3E5 623 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 CERS6Q6ZMG9 384 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 DCDC5Q6ZRR9 648 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 HMGN2P46Q86SG4 172 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TMPRSS11BQ86T26 416 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 GANCQ8TET4 914 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 SNX19Q92543 992 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TFAP2CQ92754 450 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 AP2M1Q96CW1 435 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 ACPTQ9BZG2 426 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 OR2AG1Q9H205 316 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 ZNF451Q9Y4E5 1061 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 PCDHB1Q9Y5F3 818 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 HS6ST1O60243 411 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 LZTS3O60299 673 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 MMP20O60882 483 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 CLDN9O95484 217 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TNFRSF1BP20333 461 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 S100A3P33764 101 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 MTHFRP42898 656 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 SLC6A11P48066 632 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 CHRNB3Q05901 458 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 ZCCHC8Q6NZY4 707 aaKnown RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 FAM20CQ8IXL6 584 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 OR2A12Q8NGT7 310 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM159Q96B96 161 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 SCRN2Q96FV2 425 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 NPLQ9BXD5 320 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 ANKRD60Q9BZ19 345 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TRIM15Q9C019 465 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 KLHL25Q9H0H3 589 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 SARDHQ9UL12 918 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
SCARF1-203ENST00000434376 TNPO3Q9Y5L0 923 aaKnown RBP15.16■□□□□ 0.02
SCARF1-203ENST00000434376 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-203ENST00000434376 TMEM247A6NEH6 219 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms