RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 ESR1P03372 595 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 MCM3P25205 808 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 PSMB5P28074 263 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 CCNFP41002 786 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 THOC5Q13769 683 aaKnown RBP12.79□□□□□ -0.36
EDEM1-202ENST00000434243 DHX34Q14147 1143 aaKnown RBP12.79□□□□□ -0.36
EDEM1-202ENST00000434243 GRM7Q14831 915 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 CYP2A13Q16696 494 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 ANKRD22Q5VYY1 191 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 FCRL6Q6DN72 434 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 KIAA0930Q6ICG6 404 aaPredicted RBP12.79□□□□□ -0.36
EDEM1-202ENST00000434243 NEPROQ6NW34 567 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 TTC27Q6P3X3 843 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 MRGPREQ86SM8 312 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
EDEM1-202ENST00000434243 CLEC1AQ8NC01 280 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 OR2Y1Q8NGV0 311 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 LPGAT1Q92604 370 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 ZNF669Q96BR6 464 aaPredicted RBP12.79□□□□□ -0.36
EDEM1-202ENST00000434243 PTERQ96BW5 349 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 PBKQ96KB5 322 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 BIRC8Q96P09 236 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 IP6K3Q96PC2 410 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 TCF12Q99081 682 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 MLXIPLQ9NP71 852 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 SLAMF7Q9NQ25 335 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 CUTCQ9NTM9 273 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 IL1RAPL1Q9NZN1 696 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 PCDHGB7Q9Y5F8 929 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 CFAP46Q8IYW2 2715 aa12.79□□□□□ -0.36
EDEM1-202ENST00000434243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 A0A0J9YVX5 310 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 A0A1B0GX78 115 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 SDR42E2A6NKP2 422 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 CEACAM4O75871 244 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 IGHEP01854 428 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 EIF2S1P05198 315 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 PKMP14618 531 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 OGNP20774 298 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 PAPD7Q5XG87 772 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 MRPL14Q6P1L8 145 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 ZUFSPQ96AP4 578 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 TRIM56Q9BRZ2 755 aaKnown RBP12.78□□□□□ -0.36
EDEM1-202ENST00000434243 ACAT2Q9BWD1 397 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 CCDC68Q9H2F9 335 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 P4HTMQ9NXG6 502 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 VPS9D1Q9Y2B5 631 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 FAM169AQ9Y6X4 670 aa12.78□□□□□ -0.36
EDEM1-202ENST00000434243 MAGEB16A2A368 324 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 TARM1B6A8C7 271 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 MASP2O00187 686 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 DSCR3O14972 297 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CNOT3O75175 753 aaKnown RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 FKBP9O95302 570 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 F7P08709 466 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CMPK1P30085 196 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 COILP38432 576 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 FASTKQ14296 549 aaKnown RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 KLHL38Q2WGJ6 581 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 FAM214AQ32MH5 1076 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ACSBG2Q5FVE4 666 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 WASHC2DQ5SRD0 308 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CCDC137Q6PK04 289 aaKnown RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 SHISA6Q6ZSJ9 500 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CAND1Q86VP6 1230 aaKnown RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CILP2Q8IUL8 1156 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 RASGEF1CQ8N431 466 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 FAM26EQ8N5C1 309 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 OR2L3Q8NG85 312 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 OR9A1PQ8NGU1 263 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 FBXO6Q9NRD1 293 aaPredicted RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 SPATA7Q9P0W8 599 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 GALPQ9UBC7 116 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
EDEM1-202ENST00000434243 CDC23Q9UJX2 597 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
EDEM1-202ENST00000434243 SPTA1P02549 2419 aa12.76□□□□□ -0.37
EDEM1-202ENST00000434243 FAM237BA0A1B0GVD1 139 aa12.76□□□□□ -0.37
EDEM1-202ENST00000434243 PRICKLE3O43900 615 aaPredicted RBP12.76□□□□□ -0.37
EDEM1-202ENST00000434243 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
EDEM1-202ENST00000434243 CTSVO60911 334 aa12.76□□□□□ -0.37
EDEM1-202ENST00000434243 USP1O94782 785 aa12.76□□□□□ -0.37
EDEM1-202ENST00000434243 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
EDEM1-202ENST00000434243 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
EDEM1-202ENST00000434243 ALPPP05187 535 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms