RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 IMP3Q9NV31 184 aaKnown RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 KLF15Q9UIH9 416 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 APOBEC2Q9Y235 224 aaKnown RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 CNOT1A5YKK6 2376 aaKnown RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 TP53BP1Q12888 1972 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 A6NCN8 305 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 TRPC5OSA6NMA1 111 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 ZNF839A8K0R7 811 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 TMEM233B4DJY2 109 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 BCAT2O15382 392 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 CSF2P04141 144 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 F3P13726 295 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 CTSEP14091 401 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 NDUFS1P28331 727 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 PNLIPRP1P54315 467 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 NXPH1P58417 271 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 CDC16Q13042 620 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 TRAF3Q13114 568 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 NAE1Q13564 534 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 SLC30A9Q6PML9 568 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 EFL1Q7Z2Z2 1120 aaKnown RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 SPATS2Q86XZ4 545 aaKnown RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 RAB42Q8N4Z0 105 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 PYCR2Q96C36 320 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 NUSAP1Q9BXS6 441 aaKnown RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 TCEAL2Q9H3H9 227 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 RXFP3Q9NSD7 469 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 APOBEC3BQ9UH17 382 aaKnown RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 LNPEPQ9UIQ6 1025 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 ZNF225Q9UK10 706 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 ANGPTL2Q9UKU9 493 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 SLC22A14Q9Y267 594 aa17.68■□□□□ 0.42
HMGN1-206ENST00000431390 TDRKHQ9Y2W6 561 aaKnown RBP17.68■□□□□ 0.42
HMGN1-206ENST00000431390 EBAG9O00559 213 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 KDM1AO60341 852 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 CRCPO75575 148 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 ENO1P06733 434 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 EBLN1P0CF75 366 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 UROSP10746 265 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 NME1P15531 152 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 JUNDP17535 347 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 CCND1P24385 295 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 PRDX3P30048 256 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 IDH3AP50213 366 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 AFF3P51826 1226 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 ERVPABLB-1P60509 514 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 UGT3A2Q3SY77 523 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 LYSMD4Q5XG99 296 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 CAPN13Q6MZZ7 669 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 DUS1LQ6P1R4 473 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 ARMCX6Q7L4S7 300 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 THOC6Q86W42 341 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 LRRC56Q8IYG6 542 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 SYTL1Q8IYJ3 562 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 SNX31Q8N9S9 440 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 MAPK15Q8TD08 544 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 RAB11FIP5Q9BXF6 653 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 INTS7Q9NVH2 962 aaKnown RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 SCHIP1Q9P0W5 487 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-206ENST00000431390 CIDEBQ9UHD4 219 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 COLEC10Q9Y6Z7 277 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 CFAP47Q6ZTR5 3102 aa17.67■□□□□ 0.42
HMGN1-206ENST00000431390 A0A1B0GTL3 188 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 OR52A4PA6NMU1 304 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 E7ENX8 843 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 DCTN3O75935 186 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 OR4F21O95013 312 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 EPORP19235 508 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 ITPKAP23677 461 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 LIMK1P53667 647 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 INHBCP55103 352 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 TAP2Q03519 686 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 PCDH1Q08174 1060 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 PRKG2Q13237 762 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 KRT33BQ14525 404 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 CYP2A13Q16696 494 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 ZNF542PQ5EBM4 170 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 CLEC6AQ6EIG7 209 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 LETMD1Q6P1Q0 360 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 LAYNQ6UX15 382 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 MILR1Q7Z6M3 343 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 OR4F6Q8NGB9 312 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 MED8Q96G25 268 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 MAGEB10Q96LZ2 347 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-206ENST00000431390 CAMK1GQ96NX5 476 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 EBF4Q9BQW3 602 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 MENTQ9BUN1 341 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 SGPP1Q9BX95 441 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 NUF2Q9BZD4 464 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 GPRC5BQ9NZH0 403 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 TRPS1Q9UHF7 1281 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 FIS1Q9Y3D6 152 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 DNAJC15Q9Y5T4 150 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 UGDHO60701 494 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 DIAPH2O60879 1101 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 EPN2O95208 641 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 EML2O95834 649 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 SLC2A4P14672 509 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 FOXA1P55317 472 aa17.66■□□□□ 0.42
HMGN1-206ENST00000431390 C21orf59P57076 290 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms