RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 DTD2Q96FN9 168 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 NSMCE2Q96MF7 247 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 CPPED1Q9BRF8 314 aaPredicted RBP13.57□□□□□ -0.24
HOXC4-202ENST00000430889 EPHX3Q9H6B9 360 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 SLC6A13Q9NSD5 602 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 GULP1Q9UBP9 304 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 PPT2Q9UMR5 302 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 OAZ3Q9UMX2 235 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 SLC8A2Q9UPR5 921 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
HOXC4-202ENST00000430889 A0A096LPI6 279 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 MYOCOSA0A1B0GUC4 107 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 OR2AG2A6NM03 316 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PDLIM1O00151 329 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 AHCYL1O43865 530 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TPST1O60507 370 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ANXA6P08133 673 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ITPKAP23677 461 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TACR1P25103 407 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 NEK2P51955 445 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 GTDC1Q4AE62 458 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 FRG2Q64ET8 278 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 MSANTD1Q6ZTZ1 278 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 SATL1Q86VE3 508 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 SLC22A15Q8IZD6 547 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 LILRA3Q8N6C8 439 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ARRDC3Q96B67 414 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 C11orf24Q96F05 449 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 APIPQ96GX9 242 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 FRG2BQ96QU4 278 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TSC22D3Q99576 134 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CCM2Q9BSQ5 444 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CHID1Q9BWS9 393 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 RBM38Q9H0Z9 239 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 KCNH6Q9H252 994 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ELOVL6Q9H5J4 265 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PIF1Q9H611 641 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CARS2Q9HA77 564 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 NTN4Q9HB63 628 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 NDUFA13Q9P0J0 144 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ITM2BQ9Y287 266 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 AP3M1Q9Y2T2 418 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TRIM64A6NGJ6 449 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 H3BNH8 94 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 WNT9AO14904 365 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PER2O15055 1255 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ATG13O75143 517 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ERN1O75460 977 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PGM3O95394 542 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CLPTM1O96005 669 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ADH1CP00326 375 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ELFN1P0C7U0 828 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 MYF6P23409 242 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ITGB7P26010 798 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 NRIP1P48552 1158 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 C21orf58P58505 322 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CSTF3Q12996 717 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 MTAPQ13126 283 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CHIT1Q13231 466 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 SLC36A3Q495N2 470 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 BCL7AQ4VC05 210 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 C9orf64Q5T6V5 341 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ATG9BQ674R7 924 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 IYDQ6PHW0 289 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF765Q7L2R6 523 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 FAM9CQ8IZT9 166 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 OR56A3Q8NH54 315 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 CLHC1Q8NHS4 586 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 SKA2Q8WVK7 121 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 AP2M1Q96CW1 435 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 OR4K3Q96R72 315 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 ATG10Q9H0Y0 220 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 KAT8Q9H7Z6 458 aaKnown RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PNPLA3Q9NST1 481 aa13.56□□□□□ -0.24
HOXC4-202ENST00000430889 SPATA6Q9NWH7 488 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
HOXC4-202ENST00000430889 PCM1Q15154 2024 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 FAM220BPB1ANY3 271 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 LDLRP01130 860 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 XPAP23025 273 aaPredicted RBP13.55□□□□□ -0.24
HOXC4-202ENST00000430889 MAPK1P28482 360 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 VIPR2P41587 438 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 PLIN5Q00G26 463 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 POM121L1PQ3SYA9 428 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 CCSMST1Q4G0I0 132 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 PDE12Q6L8Q7 609 aaKnown RBP13.55□□□□□ -0.24
HOXC4-202ENST00000430889 ERAP2Q6P179 960 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 ISLR2Q6UXK2 745 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 THOC6Q86W42 341 aaKnown RBP13.55□□□□□ -0.24
HOXC4-202ENST00000430889 OR2T12Q8NG77 320 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms