RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PRB1P04280 392 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 ERGP11308 486 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 MAGP20916 626 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PTPN4P29074 926 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 SKIV2L2P42285 1042 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 RPL21P46778 160 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CARSP49589 748 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 RGS4P49798 205 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PDIA2Q13087 525 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CALCOCO2Q13137 446 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CBLBQ13191 982 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CUL1Q13616 776 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 LY6DQ14210 128 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 NAA25Q14CX7 972 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 ZC3H12BQ5HYM0 836 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 TEDDM1Q5T9Z0 273 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 STEAP4Q687X5 459 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 LRRC8EQ6NSJ5 796 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 TLDC1Q6P9B6 456 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CYHR1Q6ZMK1 362 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 DSELQ8IZU8 1212 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 LMNTD1Q8N9Z9 388 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 SLC38A9Q8NBW4 561 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 FBXO15Q8NCQ5 510 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CD200R1Q8TD46 325 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 ASB11Q8WXH4 323 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 MR1Q95460 341 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 ZUFSPQ96AP4 578 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CFAP36Q96G28 342 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 DPH2Q9BQC3 489 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 WDR83Q9BRX9 315 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 AKIRIN1Q9H9L7 192 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PLAC1Q9HBJ0 212 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PCMTD2Q9NV79 361 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 TAS2R13Q9NYV9 303 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 WHRNQ9P202 907 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 TRMT6Q9UJA5 497 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 TSR3Q9UJK0 312 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 CORO1CQ9ULV4 474 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 SRPK3Q9UPE1 567 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 PLCL2Q9UPR0 1127 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 FARSAQ9Y285 508 aaKnown RBP9.45□□□□□ -0.9
HDAC6-207ENST00000430858 LOC400499M0QZD8 3231 aa9.45□□□□□ -0.9
HDAC6-207ENST00000430858 A0A1W2PPV9 198 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 H3BMH7 237 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 GFYI3L273 518 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ZSCAN9O15535 394 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 RAD51CO43502 376 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 HCRTR1O43613 425 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 C1QL1O75973 258 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 AHSGP02765 367 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 RAB40ALP0C0E4 278 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 AGXTP21549 392 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 GABRB3P28472 473 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 CCR10P46092 362 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 MRPS25P82663 173 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 CKAP4Q07065 602 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 C2orf54Q08AI8 447 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ERV3-1Q14264 604 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 FASTKQ14296 549 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 DEFB110Q30KQ9 67 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 RHBDD2Q6NTF9 364 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 FAM199XQ6PEV8 388 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 TRMT10BQ6PF06 316 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 FIGLAQ6QHK4 219 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF572Q7Z3I7 529 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 SYVN1Q86TM6 617 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 MCATQ8IVS2 390 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 FAM20CQ8IXL6 584 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 CPNE9Q8IYJ1 553 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 SYTL1Q8IYJ3 562 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF843Q8N446 348 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 EXD3Q8N9H8 876 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 OR2L3Q8NG85 312 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 OR2A1Q8NGT9 310 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 PROKR1Q8TCW9 393 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 APOBEC4Q8WW27 367 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 SMPDL3AQ92484 453 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 PKP4Q99569 1192 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 NDNQ99608 321 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 MIPEPQ99797 713 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 C17orf62Q9BQA9 187 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 NLNQ9BYT8 704 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 SPRTNQ9H040 489 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 CHST8Q9H2A9 424 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ADNPQ9H2P0 1102 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 ACTL8Q9H568 366 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 IRAK4Q9NWZ3 460 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 GEMIN8Q9NWZ8 242 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 EURLQ9NYK6 297 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 POLHQ9Y253 713 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 KLHL20Q9Y2M5 609 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms