RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 DCST1Q5T197 706 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 AUTS2Q8WXX7 1259 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 MIR1-1HGQ9H1L0 117 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 PHF11Q9UIL8 331 aa11.28□□□□□ -0.6
PTCH1-208ENST00000430669 AHCYL1O43865 530 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 UGT1A5P35504 534 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 RALGPS2Q86X27 583 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF513Q8N8E2 541 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 GEMIN6Q8WXD5 167 aaKnown RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 ACAT2Q9BWD1 397 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 ZDHHC7Q9NXF8 308 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 FBXL12Q9NXK8 326 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 DRGXA6NNA5 263 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 GATMP50440 423 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 ZIK1Q3SY52 487 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 FAM124AQ86V42 546 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 MOAP1Q96BY2 351 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 RNFT2Q96EX2 444 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 CASD1Q96PB1 797 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 EBPLQ9BY08 206 aa11.27□□□□□ -0.6
PTCH1-208ENST00000430669 PDP1Q9P0J1 537 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-208ENST00000430669 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 MFN2O95140 757 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CD1DP15813 335 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 HMGCLP35914 325 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CDK9P50750 372 aaKnown RBP11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CCR4P51679 360 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 USP46P62068 366 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 RBM48Q5RL73 367 aaKnown RBP11.27□□□□□ -0.61
PTCH1-208ENST00000430669 OR8H2Q8N162 312 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 OR8J3Q8NGG0 315 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CIB1Q99828 191 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 NUAK2Q9H093 628 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 LZTS1Q9Y250 596 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 MAP4K5Q9Y4K4 846 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 AMIGO2Q86SJ2 522 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF248Q8NDW4 579 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 SLC5A11Q8WWX8 675 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 COPS7AQ9UBW8 275 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 GNSP15586 552 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 RPS3P23396 243 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTCH1-208ENST00000430669 HNF1BP35680 557 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CAPGP40121 348 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CCR10P46092 362 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CNTN4Q8IWV2 1026 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 FAM47BQ8NA70 645 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 SMPDL3AQ92484 453 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 NECTIN4Q96NY8 510 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
PTCH1-208ENST00000430669 GSDMCQ9BYG8 508 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 RHBGQ9H310 441 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.61
PTCH1-208ENST00000430669 CAMKVQ8NCB2 501 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 NECTIN3Q9NQS3 549 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 KLHL42Q9P2K6 505 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 P2RX2Q9UBL9 471 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 SLC35E2BP0CK96 405 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 UGT1A4P22310 534 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 UGT1A3P35503 534 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 PSAT1Q9Y617 370 aa11.27□□□□□ -0.61
PTCH1-208ENST00000430669 FDXRP22570 491 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 LY6G5CQ5SRR4 150 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ZCCHC7Q8N3Z6 543 aaKnown RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 PIH1D2Q8WWB5 315 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 RGS10O43665 173 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 IFI44LQ53G44 452 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 OR5K1Q8NHB7 308 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SLC38A3Q99624 504 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ELOVL2Q9NXB9 296 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 GJB5O95377 273 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ARMC4Q5T2S8 1044 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 TMC5Q6UXY8 1006 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CHST15Q7LFX5 561 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 GPRC5BQ9NZH0 403 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SLC7A8Q9UHI5 535 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 GREB1Q4ZG55 1949 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 BCAS2O75934 225 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 S1PR4O95977 384 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 PGRP06401 933 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 C7P10643 843 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 PRG2P13727 222 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SLBPQ14493 270 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 ACSBG2Q5FVE4 666 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 MTERF3Q96E29 417 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CCDC106Q9BWC9 280 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 SCML1Q9UN30 329 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-208ENST00000430669 CSF2RAP15509 400 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 BMPR1AP36894 532 aa11.26□□□□□ -0.61
PTCH1-208ENST00000430669 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms