RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 ELFN1P0C7U0 828 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CYP2A6P11509 494 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 DRD2P14416 443 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 ZNF30P17039 623 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 OGNP20774 298 aaKnown RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 GP5P40197 560 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 MSH2P43246 934 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CSE1LP55060 971 aaKnown RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 POLR2LP62875 67 aaKnown RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 TMPRSS15P98073 1019 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 XIAPP98170 497 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 MPP1Q00013 466 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CDK3Q00526 305 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 PEX6Q13608 980 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 SEMA3AQ14563 771 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 ZNF630Q2M218 657 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 TYSND1Q2T9J0 566 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 ZNF470Q6ECI4 717 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 PWWP2BQ6NUJ5 590 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 DOK6Q6PKX4 331 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 KIAA0408Q6ZU52 694 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 DENND6AQ8IWF6 608 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CTAGE3PQ8IX95 158 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 LMNTD2Q8IXW0 634 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 NDUFAF2Q8N183 169 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 NXPE1Q8N323 547 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 C2CD4AQ8NCU7 369 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 GPR150Q8NGU9 434 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 HDAC10Q969S8 669 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 ISL2Q96A47 359 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CDKN2AIPNLQ96HQ2 116 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 RBBP8Q99708 897 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 MDFIQ99750 246 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 CPNE1Q99829 537 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 GPR63Q9BZJ6 419 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 ZBTB20Q9HC78 741 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 SARS2Q9NP81 518 aaKnown RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 PHPT1Q9NRX4 125 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 NSMCE4AQ9NXX6 385 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 SLC17A4Q9Y2C5 497 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-212ENST00000430617 HCFC1P51610 2035 aa9.78□□□□□ -0.84
ATG4B-212ENST00000430617 TLDC2A0PJX2 215 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 HMGB1P1B2RPK0 211 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PSMD11O00231 422 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 STX7O15400 261 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 RGS16O15492 202 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 KIF1CO43896 1103 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 MT-ND3P03897 115 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 STSP08842 583 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CD99P14209 185 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CNTFP26441 200 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 GABRB3P28472 473 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 MC4RP32245 332 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CA5AP35218 305 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 SPAM1P38567 509 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 HADHAP40939 763 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 MAGEA12P43365 314 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 SERPINB9P50453 376 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 DCDC1P59894 354 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 RPS15P62841 145 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PRAMEP78395 509 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PTSQ03393 145 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 GPS2Q13227 327 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 BMPR2Q13873 1038 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 ACOX1Q15067 660 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 NEPROQ6NW34 567 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 DUS1LQ6P1R4 473 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 MTERF4Q7Z6M4 381 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 TRABD2AQ86V40 505 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PPP1R3BQ86XI6 285 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PLXDC1Q8IUK5 500 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CILP2Q8IUL8 1156 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CBARPQ8N350 705 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PAF1Q8N7H5 531 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CALML6Q8TD86 181 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 COQ10AQ96MF6 247 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 TGM7Q96PF1 710 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PLEKHG4BQ96PX9 1271 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 GSX1Q9H4S2 264 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 BPIFA1Q9NP55 256 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PPANQ9NQ55 473 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 AGPAT4Q9NRZ5 378 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CATSPERZQ9NTU4 200 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 C5AR2Q9P296 337 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 TBK1Q9UHD2 729 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 FBXO5Q9UKT4 447 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 FARSAQ9Y285 508 aaKnown RBP9.77□□□□□ -0.85
ATG4B-212ENST00000430617 TMEM98Q9Y2Y6 226 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 PKP3Q9Y446 797 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CSAG2Q9Y5P2 127 aa9.77□□□□□ -0.85
ATG4B-212ENST00000430617 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
ATG4B-212ENST00000430617 TRBV5-4A0A0C4DH59 114 aa9.76□□□□□ -0.85
ATG4B-212ENST00000430617 A0A1B0GUH1 482 aa9.76□□□□□ -0.85
ATG4B-212ENST00000430617 AGAP14A8MT82 685 aa9.76□□□□□ -0.85
ATG4B-212ENST00000430617 FOXO6A8MYZ6 492 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms