RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZNF655Q8N720 491 aaPredicted RBP16.92■□□□□ 0.3
NUP50-208ENST00000430547 PROKR1Q8TCW9 393 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 DLG3Q92796 817 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 SIGLEC10Q96LC7 697 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 RUNDC3BQ96NL0 473 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 FAM114A2Q9NRY5 505 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 EURLQ9NYK6 297 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 PCYOX1Q9UHG3 505 aa16.92■□□□□ 0.3
NUP50-208ENST00000430547 SUV39H1O43463 412 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 HCRTR1O43613 425 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 MATN4O95460 622 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 CATP04040 527 aaKnown RBP16.91■□□□□ 0.3
NUP50-208ENST00000430547 GBX1Q14549 363 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 ACSBG2Q5FVE4 666 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 C1orf189Q5VU69 101 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 FIGLAQ6QHK4 219 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 APLFQ8IW19 511 aaPredicted RBP16.91■□□□□ 0.3
NUP50-208ENST00000430547 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 SLCO2A1Q92959 643 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
NUP50-208ENST00000430547 DHRS4Q9BTZ2 278 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 ACSS2Q9NR19 701 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 NDOR1Q9UHB4 597 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 COMMD10Q9Y6G5 202 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 FAM169AQ9Y6X4 670 aa16.91■□□□□ 0.3
NUP50-208ENST00000430547 KRT87PA6NCN2 255 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 ARGFXA6NJG6 315 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 TTC4O95801 387 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 CD63P08962 238 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 CBSLP0DN79 551 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 PSMB5P28074 263 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 CBSP35520 551 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 DCDP81605 110 aaKnown RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 TSTA3Q13630 321 aaPredicted RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 NAA25Q14CX7 972 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 MLIPQ5VWP3 458 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 SYDE1Q6ZW31 735 aaPredicted RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 RAB43Q86YS6 212 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 MCATQ8IVS2 390 aaKnown RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 OR9A1PQ8NGU1 263 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 HMGCLL1Q8TB92 370 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 ZUFSPQ96AP4 578 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 PDLIM2Q96JY6 352 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 MIPEPQ99797 713 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 NAT9Q9BTE0 207 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 TRIM4Q9C037 500 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 IFT80Q9P2H3 777 aaPredicted RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 DHCR7Q9UBM7 475 aaKnown RBP16.9■□□□□ 0.3
NUP50-208ENST00000430547 ANAPC2Q9UJX6 822 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 TLK1Q9UKI8 766 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 FBXO5Q9UKT4 447 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 TP53TG5Q9Y2B4 290 aa16.9■□□□□ 0.3
NUP50-208ENST00000430547 ZNF839A8K0R7 811 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 ARHGEF33A8MVX0 844 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 TARM1B6A8C7 271 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 H3BMH7 237 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 VPS26AO75436 327 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 PSIP1O75475 530 aaKnown RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 CAPN1P07384 714 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 F7P08709 466 aaPredicted RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 ALAS2P22557 587 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 CMPK1P30085 196 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 GRIA3P42263 894 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 PTGIRP43119 386 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 CLCN7P51798 805 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 ARSFP54793 590 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 DR1Q01658 176 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 DHX9Q08211 1270 aaKnown RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 CUL1Q13616 776 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 CRYMQ14894 314 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 TCTE1Q5JU00 501 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 PAPD7Q5XG87 772 aaKnown RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 ZNF385CQ66K41 422 aaPredicted RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 TCTN3Q6NUS6 607 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 NEK10Q6ZWH5 1172 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 AGGF1Q8N302 714 aaeCLIP16.89■□□□□ 0.29
NUP50-208ENST00000430547 TTC29Q8NA56 475 aaPredicted RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 OR2L3Q8NG85 312 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 GBP5Q96PP8 586 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 SELENOSQ9BQE4 189 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 KLHL42Q9P2K6 505 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 G3BP2Q9UN86 482 aaKnown RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 TNRC6AQ8NDV7 1962 aaKnown RBP16.89■□□□□ 0.29
NUP50-208ENST00000430547 ANKRD12Q6UB98 2062 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 HEATR5BQ9P2D3 2071 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 BSNQ9UPA5 3926 aa16.89■□□□□ 0.29
NUP50-208ENST00000430547 PYCARD-AS1I3L0S3 204 aa16.88■□□□□ 0.29
NUP50-208ENST00000430547 DNAJB5O75953 348 aa16.88■□□□□ 0.29
NUP50-208ENST00000430547 SYF2O95926 243 aaKnown RBP16.88■□□□□ 0.29
NUP50-208ENST00000430547 CTSBP07858 339 aa16.88■□□□□ 0.29
NUP50-208ENST00000430547 ENO3P13929 434 aaPredicted RBP16.88■□□□□ 0.29
NUP50-208ENST00000430547 RPA3P35244 121 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms