RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MAPK3P27361 379 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 CCND3P30281 292 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 LHX1P48742 406 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 UCP2P55851 309 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 KIAA1024LP59773 190 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 HILS1P60008 231 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 STX1BP61266 288 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 COG7P83436 770 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 FOLH1Q04609 750 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 FOXM1Q08050 763 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 PTPN14Q15678 1187 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 CTU2Q2VPK5 515 aaKnown RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 KBTBD12Q3ZCT8 623 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF672Q499Z4 452 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 AARDQ4LEZ3 155 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 C9orf50Q5SZB4 431 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 GFI1BQ5VTD9 330 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SUSD4Q5VX71 490 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZDHHC20Q5W0Z9 365 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 PRR27Q6MZM9 219 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TRNP1Q6NT89 227 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TUBA1AQ71U36 451 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 BTN2A1Q7KYR7 527 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 NLRP14Q86W24 1093 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SERPINA12Q8IW75 414 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 CCDC83Q8IWF9 413 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TIGD4Q8IY51 512 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF34Q8IZ26 560 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 GCSAMQ8N6F7 178 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 LPCAT1Q8NF37 534 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 NEK11Q8NG66 645 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 VANGL1Q8TAA9 524 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC38A5Q8WUX1 472 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SECTM1Q8WVN6 248 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SMPDL3BQ92485 455 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 FIG4Q92562 907 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SYN2Q92777 582 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 STAMBPL1Q96FJ0 436 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TMEM19Q96HH6 336 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 RAD9AQ99638 391 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 EGFL8Q99944 293 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TUBA1CQ9BQE3 449 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SPXQ9BT56 116 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 GTPBP2Q9BX10 602 aaKnown RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC2A11Q9BYW1 496 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ACPTQ9BZG2 426 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 FN3KQ9H479 309 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 EVA1AQ9H8M9 152 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 UBTD1Q9HAC8 227 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ANO10Q9NW15 660 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 HPF1Q9NWY4 346 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 C1RLQ9NZP8 487 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TBC1D7Q9P0N9 293 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 EPS15L1Q9UBC2 864 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCNG2Q9UJ96 466 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 FBXL2Q9UKC9 423 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 GMEB2Q9UKD1 530 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 ICAM5Q9UMF0 924 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 STX8Q9UNK0 236 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCNK6Q9Y257 313 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 AMDHD2Q9Y303 409 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 CKAP5Q14008 2032 aa2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 TCF20Q9UGU0 1960 aaKnown RBP2.8□□□□□ -1.96
HMGB1P9-201ENST00000429856 A0A0G2JPF8 293 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 DUXAA6NLW8 204 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 HNRNPCL3B7ZW38 293 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 HS3ST1O14792 307 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 CPLX1O14810 134 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 MID1O15344 667 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCNN4O15554 427 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 BUB3O43684 328 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 MOCS3O95396 460 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 GSRP00390 522 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PLGP00747 810 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 GH1P01241 217 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 F7P08709 466 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SBK2P0C263 348 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ANKRD34CP0C6C1 535 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SMIM18P0DKX4 95 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 HNRNPCL4P0DMR1 293 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ACP2P11117 423 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 DESP17661 470 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 VCLP18206 1134 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 RPA1P27694 616 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 CORO1AP31146 461 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 USP8P40818 1118 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 FRKP42685 505 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 MAGEB1P43366 347 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF75DP51815 510 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LUMP51884 338 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 SNU13P55769 128 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 MTCP1P56278 107 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 EVCP57679 992 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 GCNT1Q02742 428 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 PDK1Q15118 436 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZRSR1Q15695 479 aaKnown RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 UGCGQ16739 394 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LACTB2Q53H82 288 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 LRRC73Q5JTD7 316 aa2.79□□□□□ -1.96
HMGB1P9-201ENST00000429856 GRTP1Q5TC63 336 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms