RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MYOCQ99972 504 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 TBC1D10AQ9BXI6 508 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 ATG10Q9H0Y0 220 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SLC22A14Q9Y267 594 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 RNF11Q9Y3C5 154 aa17.43■□□□□ 0.38
AC055811.2-201ENST00000427497 SLC30A4O14863 429 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 ALDOCP09972 364 aaKnown RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 COX4I1P13073 169 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 HNRNPA2B1P22626 353 aaKnown RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 MPLP40238 635 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 ARL1P40616 181 aaPredicted RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 CPA2P48052 419 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 HTR6P50406 440 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 SQLEQ14534 574 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 HERC3Q15034 1050 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 GGTA1PQ4G0N0 100 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 PYCR3Q53H96 274 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 C11orf74Q86VG3 221 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 PGBD3Q8N328 593 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 SNX31Q8N9S9 440 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 UTP4Q969X6 686 aaKnown RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 TUBGCP3Q96CW5 907 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 BMFQ96LC9 184 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 MIPEPQ99797 713 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 SLC29A3Q9BZD2 475 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 NCOR2Q9Y618 2525 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 DCDC2BA2VCK2 349 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 B2RBV5 119 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 FPGTO14772 594 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 KCNJ13O60928 360 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 CLDN9O95484 217 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 LBPP18428 481 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 HMOX2P30519 316 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 MNAT1P51948 309 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 CLDN2P57739 230 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 PCDH1Q08174 1060 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 PTK2BQ14289 1009 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 GRB7Q14451 532 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 AASDHQ4L235 1098 aaPredicted RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 Q6ZSR9 355 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 L3MBTL4Q8NA19 623 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 OR9A1PQ8NGU1 263 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 OR2T11Q8NH01 316 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 HMGCLL1Q8TB92 370 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 C1orf21Q9H246 121 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 INTS7Q9NVH2 962 aaKnown RBP17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 ACSL5Q9ULC5 683 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 SUFUQ9UMX1 484 aa17.42■□□□□ 0.38
AC055811.2-201ENST00000427497 KCNE1BA0A087WTH5 132 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 PRAMEF4O60810 478 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 KRT16P08779 473 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 CD1EP15812 388 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 BCKDHBP21953 392 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 ITPKAP23677 461 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 CCR5P51681 352 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 IRX1P78414 480 aaPredicted RBP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 NAE1Q13564 534 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 PRAMEF9Q5VWM5 478 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 PMS2CLQ68D20 193 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 CAPRIN2Q6IMN6 1127 aaKnown RBP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 SCIMPQ6UWF3 145 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 CHST15Q7LFX5 561 aaPredicted RBP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 THOC6Q86W42 341 aaKnown RBP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 GALNT13Q8IUC8 556 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 RBM15BQ8NDT2 890 aaKnown RBP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 FBXO27Q8NI29 283 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 MAGEC3Q8TD91 643 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 ZNF480Q8WV37 535 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 ACTR8Q9H981 624 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 EBF2Q9HAK2 575 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 FGF22Q9HCT0 170 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 RIC8BQ9NVN3 520 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 GIMAP2Q9UG22 337 aa17.41■□□□□ 0.38
AC055811.2-201ENST00000427497 H0YHG0 523 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 GYG2O15488 501 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 IGHV4-34P06331 123 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 THRAP10827 490 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 ACP5P13686 325 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 CPOXP36551 454 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 NFATC4Q14934 902 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 ABRAXAS2Q15018 415 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 IL27RAQ6UWB1 636 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 GCNT7Q6ZNI0 430 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 SPATA19Q7Z5L4 167 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 TMEM145Q8NBT3 493 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 RP9Q8TA86 221 aaKnown RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 RLN3Q8WXF3 142 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 TFGQ92734 400 aaPredicted RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 USP7Q93009 1102 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 MAGEB10Q96LZ2 347 aaPredicted RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 RAB3IPQ96QF0 476 aaPredicted RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 OR4K3Q96R72 315 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 SMOC1Q9H4F8 434 aa17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 C6orf106Q9H6K1 298 aaPredicted RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 MRPL40Q9NQ50 206 aaKnown RBP17.4■□□□□ 0.38
AC055811.2-201ENST00000427497 RXFP3Q9NSD7 469 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms