RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 OR2B3O76000 313 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 RAB40ALP0C0E4 278 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 MAGP20916 626 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 PTPN4P29074 926 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 OAS2P29728 719 aaKnown RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 RPS15P62841 145 aaKnown RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 NAA25Q14CX7 972 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 SF1Q15637 639 aaKnown RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 CCSMST1Q4G0I0 132 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 TLDC1Q6P9B6 456 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 ZNF843Q8N446 348 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 EXD3Q8N9H8 876 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 OR9A1PQ8NGU1 263 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 CD200R1Q8TD46 325 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 ASB11Q8WXH4 323 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 MR1Q95460 341 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 CLIP3Q96DZ5 547 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 RNF31Q96EP0 1072 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 GPR21Q99679 349 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 SLC30A3Q99726 388 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 ERP44Q9BS26 406 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 AKIRIN1Q9H9L7 192 aaPredicted RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 PCMTD2Q9NV79 361 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 TUBD1Q9UJT1 453 aa17.78■□□□□ 0.44
MSH5-207ENST00000425703 MRPS18BQ9Y676 258 aaKnown RBP17.78■□□□□ 0.44
MSH5-207ENST00000425703 ZNF839A8K0R7 811 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 GFYI3L273 518 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 ZNF749O43361 778 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 KATNA1O75449 491 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 PRB1P04280 392 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 F7P08709 466 aaPredicted RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 PRKAR1AP10644 381 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 GABRB3P28472 473 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 CCR10P46092 362 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 RPL21P46778 160 aaKnown RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 PRAMEF17Q5VTA0 474 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 FAM199XQ6PEV8 388 aaPredicted RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 SYT10Q6XYQ8 523 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 C17orf53Q8N3J3 647 aaPredicted RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 C2orf73Q8N5S3 287 aaPredicted RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 WDR83Q9BRX9 315 aaKnown RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 TRIM31Q9BZY9 425 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 SEMA4CQ9C0C4 833 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 ACTL8Q9H568 366 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 GEMIN8Q9NWZ8 242 aaKnown RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 TAS2R13Q9NYV9 303 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 WHRNQ9P202 907 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 CORO1CQ9ULV4 474 aaPredicted RBP17.77■□□□□ 0.44
MSH5-207ENST00000425703 SRPK3Q9UPE1 567 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 CHMP2BQ9UQN3 213 aa17.77■□□□□ 0.44
MSH5-207ENST00000425703 FASNP49327 2511 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 COL6A6A6NMZ7 2263 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 AHSGP02765 367 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 CARSP49589 748 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 ZC3H12BQ5HYM0 836 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 TEDDM1Q5T9Z0 273 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 RHBDD2Q6NTF9 364 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 C16orf46Q6P387 395 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 FIGLAQ6QHK4 219 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 CYHR1Q6ZMK1 362 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 ZNF572Q7Z3I7 529 aaPredicted RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 SYVN1Q86TM6 617 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 TAX1BP1Q86VP1 789 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 SYTL1Q8IYJ3 562 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 OR2L3Q8NG85 312 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 OR2A1Q8NGT9 310 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 PROKR1Q8TCW9 393 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 APOBEC4Q8WW27 367 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 SMPDL3AQ92484 453 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 PWWP2AQ96N64 755 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 C17orf62Q9BQA9 187 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 NLNQ9BYT8 704 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 SLC7A5P2Q9GIP4 190 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 CHST8Q9H2A9 424 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 PPANQ9NQ55 473 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 EURLQ9NYK6 297 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 TRMT6Q9UJA5 497 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 FARSAQ9Y285 508 aaKnown RBP17.76■□□□□ 0.43
MSH5-207ENST00000425703 SNX24Q9Y343 169 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 SPTA1P02549 2419 aa17.76■□□□□ 0.43
MSH5-207ENST00000425703 A0A1W2PPV9 198 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 ZSCAN9O15535 394 aaPredicted RBP17.75■□□□□ 0.43
MSH5-207ENST00000425703 HCRTR1O43613 425 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 ZBTB14O43829 449 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 FAM87AP0C7U9 286 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 AGXTP21549 392 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 GRIA3P42263 894 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 POLE2P56282 527 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 TIAL1Q01085 375 aaKnown RBP eCLIP17.75■□□□□ 0.432e-9■■■■□ 19.7
MSH5-207ENST00000425703 PDIA2Q13087 525 aaKnown RBP17.75■□□□□ 0.43
MSH5-207ENST00000425703 CALCOCO2Q13137 446 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 CUL1Q13616 776 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 DEFB110Q30KQ9 67 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 ZNF385CQ66K41 422 aaPredicted RBP17.75■□□□□ 0.43
MSH5-207ENST00000425703 FCRL6Q6DN72 434 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 MCATQ8IVS2 390 aaKnown RBP17.75■□□□□ 0.43
MSH5-207ENST00000425703 CFAP36Q96G28 342 aa17.75■□□□□ 0.43
MSH5-207ENST00000425703 PKP4Q99569 1192 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms