RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MEAF6Q9HAF1 191 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PRDM8Q9NQV8 689 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 NLGN3Q9NZ94 848 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 GULP1Q9UBP9 304 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 TBC1D29Q9UFV1 150 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CDV3Q9UKY7 258 aaKnown RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 TNPO3Q9Y5L0 923 aaKnown RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CEP250Q9BV73 2442 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 B4DGG1 531 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 SUPT3HB4E1H0 165 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 UBXN8O00124 270 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 EIF3FO00303 357 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 BTN3A1O00481 513 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 TM4SF5O14894 197 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 NIPSNAP2O75323 286 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 SUPT3HO75486 399 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 AP2A2O94973 939 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 TRIM16O95361 564 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 TSPAN12O95859 305 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 OR56A5P0C7T3 313 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CBSLP0DN79 551 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 RPL10P27635 214 aaKnown RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CBSP35520 551 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CDC16Q13042 620 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 UBAP2LQ14157 1087 aaKnown RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 LSM12Q3MHD2 195 aaKnown RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CHCHD4Q8N4Q1 142 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 LILRA3Q8N6C8 439 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 DEFB124Q8NES8 71 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CFAP61Q8NHU2 1237 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 AGR3Q8TD06 166 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 MAPK15Q8TD08 544 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 EEF1AKMT1Q8WVE0 214 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 PATE1Q8WXA2 126 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 UTP4Q969X6 686 aaKnown RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 FAM136AQ96C01 138 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 TIMM29Q9BSF4 260 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 CADM1Q9BY67 442 aaKnown RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 NUDT4Q9NZJ9 180 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 BAIAP2L1Q9UHR4 511 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 PCOLCE2Q9UKZ9 415 aa15.21■□□□□ 0.03
SHOX2-202ENST00000425436 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-202ENST00000425436 GOLGA4Q13439 2230 aaKnown RBP15.21■□□□□ 0.02
SHOX2-202ENST00000425436 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 E9PBE3 544 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 SLC30A4O14863 429 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 KLHL41O60662 606 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 ALPPL2P10696 532 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 CCND1P24385 295 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 MXRA7P84157 204 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 KLF10Q13118 480 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 HERC3Q15034 1050 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
SHOX2-202ENST00000425436 C6orf132Q5T0Z8 1188 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 METTL2BQ6P1Q9 378 aaKnown RBP15.2■□□□□ 0.02
SHOX2-202ENST00000425436 RINLQ6ZS11 566 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 PIP4P1Q86T03 277 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 MYO1HQ8N1T3 1032 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 SDR16C5Q8N3Y7 309 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 OR2L2Q8NH16 312 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
SHOX2-202ENST00000425436 LKAAEAR1Q8TD35 194 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 ZDHHC1Q8WTX9 485 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 APOLD1Q96LR9 279 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 OR52B2Q96RD2 323 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 CCT7Q99832 543 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 DUSP23Q9BVJ7 150 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 PSMD13Q9UNM6 376 aa15.2■□□□□ 0.02
SHOX2-202ENST00000425436 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 GIPC1O14908 333 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 KPNA5O15131 536 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 VPS4BO75351 444 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 LDOC1O95751 146 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 S100BP04271 92 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 VCLP18206 1134 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 EPHA3P29320 983 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 PGM1P36871 562 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 CCR10P46092 362 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 RAP1GDS1P52306 607 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 LCP2Q13094 533 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 INAVAQ3KP66 663 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 C6orf163Q5TEZ5 329 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 NXNQ6DKJ4 435 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 XKR5Q6UX68 686 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 SPNS2Q8IVW8 549 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 SLC35F3Q8IY50 421 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 FAM13CQ8NE31 585 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 ELMO1Q92556 727 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 CNDP2Q96KP4 475 aaKnown RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 LINC00615Q96LM1 132 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 MIPEPQ99797 713 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 RTKNQ9BST9 563 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 WDR55Q9H6Y2 383 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 SARS2Q9NP81 518 aaKnown RBP15.19■□□□□ 0.02
SHOX2-202ENST00000425436 NDE1Q9NXR1 346 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 WDR37Q9Y2I8 494 aa15.19■□□□□ 0.02
SHOX2-202ENST00000425436 PRR19A6NJB7 356 aa15.18■□□□□ 0.02
SHOX2-202ENST00000425436 CDC7O00311 574 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms