RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 ITGA3P26006 1051 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CDH11P55287 796 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TFCP2Q12800 502 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PHLDA2Q53GA4 152 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CYP4A22Q5TCH4 519 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ARHGAP17Q68EM7 881 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 C11orf63Q6NUN7 778 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 SUSD1Q6UWL2 747 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CEACAM20Q6UY09 585 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZBTB49Q6ZSB9 765 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CFAP206Q8IYR0 622 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 NKAIN3Q8N8D7 197 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 THAP8Q8NA92 274 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 OR11H4Q8NGC9 324 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 OR10V1Q8NGI7 309 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 OR52N5Q8NH56 324 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 KIF18AQ8NI77 898 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PHLDA1Q8WV24 401 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MRPS27Q92552 414 aaKnown RBP4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 EXT2Q93063 718 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 OTUB1Q96FW1 271 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZMAT2Q96NC0 199 aaKnown RBP4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 F2RL3Q96RI0 385 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 FAM129AQ9BZQ8 928 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CDH20Q9HBT6 801 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
RAB3GAP1-202ENST00000425393 BLOC1S5-TXNDC5H3BN57 136 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CIDEAO60543 219 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 IGHV4-31P0DP07 118 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 SAGP10523 405 aaPredicted RBP4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CA6P23280 308 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ALDH4A1P30038 563 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TUBB4BP68371 445 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TNIP1Q15025 636 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 NPTX1Q15818 432 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 C6orf136Q5SQH8 315 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF772Q68DY9 489 aaPredicted RBP4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 KRT39Q6A163 491 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 FAM53AQ6NSI3 398 aaPredicted RBP4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 IL27RAQ6UWB1 636 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 IL17RELQ6ZVW7 336 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ARHGAP22Q7Z5H3 698 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 KRT77Q7Z794 578 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF611Q8N823 705 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF383Q8NA42 475 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 FAM20AQ96MK3 541 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 EGFL8Q99944 293 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 S1PR5Q9H228 398 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 FGF21Q9NSA1 209 aa4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CPSF3Q9UKF6 684 aaKnown RBP4.37□□□□□ -1.71
RAB3GAP1-202ENST00000425393 IGKV3D-20A0A0C4DH25 116 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CASTOR2A6NHX0 329 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 O00370 1275 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CLIC2O15247 247 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PCDH7O60245 1069 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 SIX3O95343 332 aaPredicted RBP4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CLPTM1O96005 669 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 GP1BBP13224 206 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 IFNAR1P17181 557 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CDC25CP30307 473 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MNDAP41218 407 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MAZP56270 477 aaKnown RBP4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 GPR17Q13304 367 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PSMD6Q15008 389 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ODF4Q2M2E3 257 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TRAT1Q6PIZ9 186 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ABI3BPQ7Z7G0 1075 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TLK2Q86UE8 772 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MFN1Q8IWA4 741 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 SLC4A11Q8NBS3 891 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 RMDN2Q96LZ7 410 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ZNF558Q96NG5 402 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 DNAJC4Q9NNZ3 241 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ECHDC1Q9NTX5 307 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 WDR83OSQ9Y284 106 aa4.36□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ANXA2P2A6NMY6 339 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 AP5Z1O43299 807 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 DIAPH2O60879 1101 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 ACSL3O95573 720 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 KRT5P13647 590 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CEACAM8P31997 349 aaPredicted RBP4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 HSPA4P34932 840 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 NPY4RP50391 375 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 UBASH3AP57075 661 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 TAF10Q12962 218 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PDLIM3Q53GG5 364 aaPredicted RBP4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 XKR3Q5GH77 459 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PIGZQ86VD9 579 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 MMD2Q8IY49 270 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 DNAJC22Q8N4W6 341 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 CNBD1Q8NA66 436 aa4.35□□□□□ -1.71
RAB3GAP1-202ENST00000425393 PIGBQ92521 554 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms