RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 COG4Q9H9E3 785 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SPACA1Q9HBV2 294 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GPR108Q9NPR9 543 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MRPS18AQ9NVS2 196 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ASNSD1Q9NWL6 643 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 EHD3Q9NZN3 535 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 FOXA2Q9Y261 457 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SLC9A8Q9Y2E8 581 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MRPS17Q9Y2R5 130 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CBY1Q9Y3M2 126 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ATP6V1DQ9Y5K8 247 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 FAM237AA0A1B0GTK4 181 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MACROD2A1Z1Q3 448 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 WIPF3A6NGB9 483 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ANKDD1BA6NHY2 528 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PCP4L1A6NKN8 68 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CGB1A6NKQ9 187 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 C4orf47A7E2U8 309 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TCP11X1B4DZS4 312 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PPP6CO00743 305 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CES2O00748 559 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ANKRD28O15084 1053 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CTDSPLO15194 276 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NDUFS4O43181 175 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DCXO43602 365 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CHMP2AO43633 222 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 LANCL1O43813 399 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 EXTL3O43909 919 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PRAMEF11O60813 436 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FCGR3BO75015 233 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ATP9AO75110 1047 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DNAJB6O75190 326 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CSO75390 466 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NME6O75414 186 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 VPS26AO75436 327 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 KDM4BO94953 1096 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ZWINTO95229 277 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 APOA1P02647 267 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CRYGCP07315 174 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 KRT19P08727 400 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SPP1P10451 314 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SLC2A3P11169 496 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CYP19A1P11511 503 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PRPS2P11908 318 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ODC1P11926 461 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PEPDP12955 493 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SLC2A4P14672 509 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DDX5P17844 614 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 UGT1A6P19224 532 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ITGALP20701 1170 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MATN1P21941 496 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DNASE1P24855 282 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ITGB8P26012 769 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ACADLP28330 430 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CD38P28907 300 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SLC6A6P31641 620 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 AKT2P31751 481 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CXCR5P32302 372 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PLA2G5P39877 138 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 HTR2BP41595 481 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PTPN9P43378 593 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MMP13P45452 471 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 IER3P46695 156 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NPBWR1P48145 328 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TOB1P50616 345 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CLCN3P51790 818 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 GPR143P51810 404 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CACNA2D1P54289 1103 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 IRX4P78413 519 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 HSD11B2P80365 405 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SHC2P98077 582 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 OCA2Q04671 838 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 LIPEQ05469 1076 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TNK1Q13470 666 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DRP2Q13474 957 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 DLG2Q15700 870 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 SYT16Q17RD7 645 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FAM83EQ2M2I3 478 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 COL28A1Q2UY09 1125 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 C6orf141Q5SZD1 244 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 RGS7BPQ6MZT1 257 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TAPT1Q6NXT6 567 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PODNL1Q6PEZ8 512 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM108Q6UXF1 575 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PAQR9Q6ZVX9 377 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 BZW1Q7L1Q6 419 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 PRSS45Q7RTY3 260 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TRMT11Q7Z4G4 463 aaKnown RBP3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TSPAN33Q86UF1 283 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 TPRA1Q86W33 373 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 FAM219AQ8IW50 185 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 KLHDC8AQ8IYD2 350 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CRYBG2Q8N1P7 616 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 CERS5Q8N5B7 392 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 BCORP1Q8N888 145 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 C8orf58Q8NAV2 365 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 ADPRHL1Q8NDY3 354 aa3.59□□□□□ -1.83
SF3B1-205ENST00000424674 NSUN7Q8NE18 718 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms