RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TAP2Q03519 686 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PRKAA1Q13131 559 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 KIR2DS3Q14952 304 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 ZXDCQ2QGD7 858 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 CDCP2Q5VXM1 449 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 RBM44Q6ZP01 1051 aaKnown RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 CDHR3Q6ZTQ4 885 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 SYTL1Q8IYJ3 562 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 C2orf73Q8N5S3 287 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PDPRQ8NCN5 879 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PPFIBP2Q8ND30 876 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 OR4D9Q8NGE8 314 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 FLVCR1-AS1Q8TAF5 88 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 ATL1Q8WXF7 558 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 SMPDL3AQ92484 453 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 APOPT1Q96IL0 206 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 EGFL8Q99944 293 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 TMBIM4Q9HC24 238 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 ZNF446Q9NWS9 450 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 ACTR10Q9NZ32 417 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 CD274Q9NZQ7 290 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 TMEM216Q9P0N5 145 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PTPRBP23467 1997 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 A0A1W2PPV9 198 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 NCF1BA6NI72 391 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 GOLGA6L10A6NI86 522 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 NCF1CA8MVU1 366 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 SUPT3HB4E1H0 165 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 COPEO14579 308 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 MAP2K7O14733 419 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 CAPN5O15484 640 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 PRICKLE3O43900 615 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 SUPT3HO75486 399 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 MTHFD2P13995 350 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 NCF1P14598 390 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 UGT2B7P16662 529 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 HNMTP50135 292 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 TBPL1P62380 186 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 SHC2P98077 582 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 HES3Q5TGS1 186 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 TMEM71Q6P5X7 295 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 ZNF574Q6ZN55 896 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 SLITRK4Q8IW52 837 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 BANPQ8N9N5 519 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 OR56A3Q8NH54 315 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 ADAMTS14Q8WXS8 1223 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 RHBDF1Q96CC6 855 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 ZDHHC12Q96GR4 267 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 TGM7Q96PF1 710 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 OR2A14Q96R47 310 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 SMC6Q96SB8 1091 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 CD180Q99467 661 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 STMN4Q9H169 189 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-202ENST00000422991 PDP2Q9P2J9 529 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 ANGPTL2Q9UKU9 493 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 EMCNQ9ULC0 261 aa16.42■□□□□ 0.22
COL7A1-202ENST00000422991 IGHV5-10-1A0A0J9YXX1 117 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TLCD2A6NGC4 264 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 ISM1B1AKI9 464 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TARM1B6A8C7 271 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SASH3O75995 380 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 S100BP04271 92 aaPredicted RBP16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SBK3P0C264 359 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 THRAP10827 490 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 PSMB5P28074 263 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 OAS2P29728 719 aaKnown RBP16.41■□□□□ 0.22
COL7A1-202ENST00000422991 CCT5P48643 541 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 CLDN6P56747 220 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 NAE1Q13564 534 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SULT1C3Q6IMI6 304 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 C16orf46Q6P387 395 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SPESP1Q6UW49 350 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SUSD1Q6UWL2 747 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 FAM92BQ6ZTR7 304 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TCAIMQ8N3R3 496 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TMEM151AQ8N4L1 468 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 UBTD2Q8WUN7 234 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SLC22A18Q96BI1 424 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TMEM79Q9BSE2 394 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SGPP1Q9BX95 441 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 ATG10Q9H0Y0 220 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 SEMA6CQ9H3T2 930 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 CCDC177Q9NQR7 707 aaPredicted RBP16.41■□□□□ 0.22
COL7A1-202ENST00000422991 CPSF2Q9P2I0 782 aaKnown RBP16.41■□□□□ 0.22
COL7A1-202ENST00000422991 ACTL7BQ9Y614 415 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 PCM1Q15154 2024 aa16.41■□□□□ 0.22
COL7A1-202ENST00000422991 TAPBPO15533 448 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 KIF1CO43896 1103 aaKnown RBP16.4■□□□□ 0.22
COL7A1-202ENST00000422991 KLK8O60259 260 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 MT-CO3P00414 261 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 PROCP04070 461 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 CREB1P16220 341 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 MPSTP25325 297 aa16.4■□□□□ 0.22
COL7A1-202ENST00000422991 PRDX3P30048 256 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms