RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TRMT1Q9NXH9 659 aaKnown RBP8.93□□□□□ -0.98
NUP50-206ENST00000422489 GALPQ9UBC7 116 aa8.93□□□□□ -0.98
NUP50-206ENST00000422489 PLAAQ9Y263 795 aa8.93□□□□□ -0.98
NUP50-206ENST00000422489 MRFAP1Q9Y605 127 aa8.93□□□□□ -0.98
NUP50-206ENST00000422489 MAD1L1Q9Y6D9 718 aa8.93□□□□□ -0.98
NUP50-206ENST00000422489 ZFC3H1O60293 1989 aaKnown RBP8.93□□□□□ -0.98
NUP50-206ENST00000422489 ATMQ13315 3056 aa8.93□□□□□ -0.98
NUP50-206ENST00000422489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 H3BMH7 237 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 PGRMC1O00264 195 aaKnown RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 SNPHO15079 494 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ESR1P03372 595 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 CD63P08962 238 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 PIM1P11309 404 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 MCM3P25205 808 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 CCNFP41002 786 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ARSFP54793 590 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 RRADP55042 308 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 FOXL2P58012 376 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 VSX2P58304 361 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 CTBP1Q13363 440 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 KLHL38Q2WGJ6 581 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 NADK2Q4G0N4 442 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ACSBG2Q5FVE4 666 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ZNF385CQ66K41 422 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 CENPUQ71F23 418 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 REXO1L1PQ8IX06 675 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 METTL27Q8N6F8 245 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 TMEM102Q8N9M5 508 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 TTC29Q8NA56 475 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 FDCSPQ8NFU4 85 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 PROKR1Q8TCW9 393 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ADAMTS17Q8TE56 1095 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 DENND1AQ8TEH3 1009 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 DLG3Q92796 817 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ZUFSPQ96AP4 578 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 PTERQ96BW5 349 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 OSBPL9Q96SU4 736 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 SELENOSQ9BQE4 189 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 MENTQ9BUN1 341 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ACAT2Q9BWD1 397 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 RAB11FIP5Q9BXF6 653 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 CCDC68Q9H2F9 335 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 XAB2Q9HCS7 855 aaKnown RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 FBXO6Q9NRD1 293 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 C20orf96Q9NUD7 363 aaPredicted RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ZC3H7BQ9UGR2 993 aaKnown RBP8.92□□□□□ -0.98
NUP50-206ENST00000422489 SRPK3Q9UPE1 567 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 ZNF451Q9Y4E5 1061 aa8.92□□□□□ -0.98
NUP50-206ENST00000422489 A0A0J9YVX5 310 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 GOLGA6L10A0A0M3HER8 536 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 FAM237BA0A1B0GVD1 139 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 TARM1B6A8C7 271 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 PRICKLE3O43900 615 aaPredicted RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 KIF5CO60282 957 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 KLF7O75840 302 aaPredicted RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 USP1O94782 785 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 MLNP12872 115 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 OGNP20774 298 aaKnown RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 PSMB5P28074 263 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 CMPK1P30085 196 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 RPA3P35244 121 aaPredicted RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 MAGEA6P43360 314 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 OR1D4P47884 311 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 YBX1P67809 324 aaKnown RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 FASTKQ14296 549 aaKnown RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 GRM7Q14831 915 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 PPP1R7Q15435 360 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 TYSND1Q2T9J0 566 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 FAM214AQ32MH5 1076 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 TTLL9Q3SXZ7 439 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 TCTE1Q5JU00 501 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 ZNF470Q6ECI4 717 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 SUSD1Q6UWL2 747 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 SHISA6Q6ZSJ9 500 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 OVCH1Q7RTY7 1134 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 ATCAYQ86WG3 371 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 CILP2Q8IUL8 1156 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 SPNS2Q8IVW8 549 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 TMEM151BQ8IW70 566 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 DENND6AQ8IWF6 608 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 MCUQ8NE86 351 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 OR9A1PQ8NGU1 263 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 GRK7Q8WTQ7 553 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.91□□□□□ -0.98
NUP50-206ENST00000422489 COL26A1Q96A83 441 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 FER1L6-AS2Q96M78 137 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 SERPINB12Q96P63 405 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 IP6K3Q96PC2 410 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 NUDT9Q9BW91 350 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 YIPF2Q9BWQ6 316 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 GRPEL1Q9HAV7 217 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 FAM114A2Q9NRY5 505 aa8.91□□□□□ -0.98
NUP50-206ENST00000422489 IARS2Q9NSE4 1012 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms