RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 TSR3Q9UJK0 312 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 RUVBL2Q9Y230 463 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 NFS1Q9Y697 457 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 SPTBN1Q01082 2364 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 SOWAHDA6NJG2 315 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 PRSS44E7EML9 344 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 DSCR3O14972 297 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 EIF2S1P05198 315 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 CD63P08962 238 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 OR56A5P0C7T3 313 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 PTMSP20962 102 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 CD9P21926 228 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 PSMA3P25788 255 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 TSFMP43897 325 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 RAB28P51157 221 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 NAP1L1P55209 391 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 RWDD2BP57060 319 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 SNRPNP63162 240 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 ITIH4Q14624 930 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 SF1Q15637 639 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 RBBP7Q16576 425 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 TUBB8Q3ZCM7 444 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 VWA2Q5GFL6 755 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 WASHC2DQ5SRD0 308 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 FAAH2Q6GMR7 532 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 PACS1Q6VY07 963 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 CNGA4Q8IV77 575 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 MCEMP1Q8IX19 187 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 SLC22A15Q8IZD6 547 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 ATG4AQ8WYN0 398 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 DLG3Q92796 817 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 MAGEB10Q96LZ2 347 aaPredicted RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 ALS2CR12Q96Q35 445 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 TAAR6Q96RI8 345 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 MIPEPQ99797 713 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 SELENOSQ9BQE4 189 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 FERMT1Q9BQL6 677 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 LACRTQ9GZZ8 138 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 LRRC40Q9H9A6 602 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 PTGFRNQ9P2B2 879 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 MARCH4Q9P2E8 410 aaPredicted RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 ZC3H7BQ9UGR2 993 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 EFR3BQ9Y2G0 817 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 REXO2Q9Y3B8 237 aaKnown RBP7.75□□□□□ -1.17
VIM-202ENST00000421459 PIKFYVEQ9Y2I7 2098 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 DOPEY1Q5JWR5 2465 aa7.75□□□□□ -1.17
VIM-202ENST00000421459 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 PDZD2O15018 2839 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 A0A0J9YVX5 310 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 GRID2IPA4D2P6 1211 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 VSTM2BA6NLU5 285 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 PRICKLE3O43900 615 aaPredicted RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 GPC4O75487 556 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 JRKO75564 520 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 TJP3O95049 919 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ONECUT2O95948 504 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 SNRPB2P08579 225 aaKnown RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 STSP08842 583 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 GSTM1P09488 218 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ZGLP1P0C6A0 271 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 EDN3P14138 238 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ETS1P14921 441 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 AOAHP28039 575 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 PTPN7P35236 360 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 BDKRB1P46663 353 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ARSFP54793 590 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 GSTM4Q03013 218 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 EEF1A2Q05639 463 aaKnown RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 KLC1Q07866 573 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 FASTKQ14296 549 aaKnown RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 SPA17Q15506 151 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 TSTD2Q5T7W7 516 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 B3GNTL1Q67FW5 361 aaPredicted RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 SIRT6Q8N6T7 355 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 DNAAF3Q8N9W5 541 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ACRBPQ8NEB7 543 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 OR6P1Q8NGX9 317 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 OR2L8Q8NGY9 312 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 OR4L1Q8NH43 312 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 STT3BQ8TCJ2 826 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 BRIX1Q8TDN6 353 aaKnown RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 PSMF1Q92530 271 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 FKBP10Q96AY3 582 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ZNF285Q96NJ3 590 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 PHF12Q96QT6 1004 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 C19orf43Q9BQ61 176 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 SLX1AQ9BQ83 275 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 CRB3Q9BUF7 120 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 SLC26A1Q9H2B4 701 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 EPS8L2Q9H6S3 715 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 WDR54Q9H977 334 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ETNK1Q9HBU6 452 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 OLAHQ9NV23 265 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 FEZ2Q9UHY8 353 aaPredicted RBP7.74□□□□□ -1.17
VIM-202ENST00000421459 SH3BGRL2Q9UJC5 107 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 C3orf18Q9UK00 162 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 ENTPD4Q9Y227 616 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 FER1L5A0AVI2 2057 aa7.74□□□□□ -1.17
VIM-202ENST00000421459 APCP25054 2843 aa7.73□□□□□ -1.17
VIM-202ENST00000421459 A0A1W2PPV9 198 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms