RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CCDC38Q502W7 563 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 FCRL6Q6DN72 434 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 ISLR2Q6UXK2 745 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 SHISA6Q6ZSJ9 500 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 LINC00523Q86TU6 105 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 DCUN1D3Q8IWE4 304 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 C2orf73Q8N5S3 287 aaPredicted RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 TTC29Q8NA56 475 aaPredicted RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 OR11G2Q8NGC1 345 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 OR2L8Q8NGY9 312 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 ASZ1Q8WWH4 475 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 ALG3Q92685 438 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 HDAC10Q969S8 669 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 MARVELD3Q96A59 401 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 THOC3Q96J01 351 aaKnown RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZNF285Q96NJ3 590 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 LMF1Q96S06 567 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 SOX17Q9H6I2 414 aaPredicted RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 CTSFQ9UBX1 484 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 SVILO95425 2214 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 LRBAP50851 2863 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 A0A1B0GUH1 482 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 FITM1A5D6W6 292 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 GOLGA6L9A6NEM1 432 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 VSTM2BA6NLU5 285 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 FKBP9O95302 570 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 STSP08842 583 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 OR1D4P47884 311 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 HSPA14Q0VDF9 509 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 Q0VFX4 171 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 GRB7Q14451 532 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 SF1Q15637 639 aaKnown RBP16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 RPUSD3Q6P087 351 aaKnown RBP16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 FAM180AQ6UWF9 173 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 UNC5DQ6UXZ4 953 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 VRK3Q8IV63 474 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 OR13J1Q8NGT2 312 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 CFAP61Q8NHU2 1237 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 SLX1AQ9BQ83 275 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 SELENOSQ9BQE4 189 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 CARD6Q9BX69 1037 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 TSSK1BQ9BXA7 367 aa16.14■□□□□ 0.17
UPF3AP3-201ENST00000420996 ARHGAP10A1A4S6 786 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 HEATR9A2RTY3 570 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 RCCD1A6NED2 376 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 TARM1B6A8C7 271 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 SRPX2O60687 465 aaPredicted RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 ZG16O60844 167 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 GOT2P00505 430 aaKnown RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 HPP00738 406 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 ELAVL4P26378 380 aaKnown RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 PPARGP37231 505 aaPredicted RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 NAP1L1P55209 391 aaKnown RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 MFAP5Q13361 173 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 SP5Q6BEB4 398 aaPredicted RBP16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 AFTPHQ6ULP2 937 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 BCORP1Q8N888 145 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 LMNTD1Q8N9Z9 388 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 OR52K1Q8NGK4 314 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 IL17FQ96PD4 163 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 CIDEBQ9UHD4 219 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 SLC39A10Q9ULF5 831 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 RIMKLBQ9ULI2 386 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 DUSP10Q9Y6W6 482 aa16.13■□□□□ 0.17
UPF3AP3-201ENST00000420996 ABCA12Q86UK0 2595 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 ERI2A8K979 691 aaKnown RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 BTNL10A8MVZ5 291 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 RASGRF2O14827 1237 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 KLHL18O94889 574 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 SLCO2B1O94956 709 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 GAS8O95995 478 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 APOA4P06727 396 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 PRF1P14222 555 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 GDF10P55107 478 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 VSX2P58304 361 aaPredicted RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 ACVR1Q04771 509 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 CDH17Q12864 832 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 WASHC2DQ5SRD0 308 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 TSTD2Q5T7W7 516 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 LINC00696Q6ZRV3 163 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 NLRP9Q7RTR0 991 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 TAB3Q8N5C8 712 aaPredicted RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 METTL27Q8N6F8 245 aaPredicted RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 CATSPER1Q8NEC5 780 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 OR4L1Q8NH43 312 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 SLC35B2Q8TB61 432 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 TRIM56Q9BRZ2 755 aaKnown RBP16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 TMEM121Q9BTD3 319 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 CRB3Q9BUF7 120 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 RAB11FIP5Q9BXF6 653 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 ZNF304Q9HCX3 659 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 OLAHQ9NV23 265 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 SLC2A6Q9UGQ3 507 aa16.12■□□□□ 0.17
UPF3AP3-201ENST00000420996 KLK4Q9Y5K2 254 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms