RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 RPS6KA1Q15418 735 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 SIX1Q15475 284 aaPredicted RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 PRR30Q53SZ7 412 aaPredicted RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 TCTE1Q5JU00 501 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 MEI1Q5TIA1 1274 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 PTRHD1Q6GMV3 140 aaKnown RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 LDB1Q86U70 411 aaPredicted RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 GSDMBQ8TAX9 411 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 ZUFSPQ96AP4 578 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 RAD51AP1Q96B01 352 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 IL17FQ96PD4 163 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 WDR54Q9H977 334 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 SLC22A11Q9NSA0 550 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 CUEDC1Q9NWM3 386 aaPredicted RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 LUZP4Q9P127 313 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 SLC39A10Q9ULF5 831 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 DRG1Q9Y295 367 aaKnown RBP16.67■□□□□ 0.26
MSH6-203ENST00000420813 KLHL20Q9Y2M5 609 aa16.67■□□□□ 0.26
MSH6-203ENST00000420813 GOLGA6L6A8MZA4 724 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 TCP11X1B4DZS4 312 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 TARM1B6A8C7 271 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 AGPSO00116 658 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 PRICKLE3O43900 615 aaPredicted RBP16.66■□□□□ 0.26
MSH6-203ENST00000420813 ZSCAN5DPP0CG00 497 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 ALAS2P22557 587 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 NPY2RP49146 381 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
MSH6-203ENST00000420813 GRM7Q14831 915 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 SF1Q15637 639 aaKnown RBP16.66■□□□□ 0.26
MSH6-203ENST00000420813 CYP2A13Q16696 494 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 FCRL6Q6DN72 434 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 FIGLAQ6QHK4 219 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 TTLL10Q6ZVT0 673 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 OVCH1Q7RTY7 1134 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 IQCKQ8N0W5 287 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 RAB42Q8N4Z0 105 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 HMGCLL1Q8TB92 370 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 SSC4DQ8WTU2 575 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 TM9SF4Q92544 642 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 ZNF285Q96NJ3 590 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 SLC26A1Q9H2B4 701 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 ZNF552Q9H707 407 aaPredicted RBP16.66■□□□□ 0.26
MSH6-203ENST00000420813 ATP13A2Q9NQ11 1180 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 BFARQ9NZS9 450 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 B3GNT3Q9Y2A9 372 aa16.66■□□□□ 0.26
MSH6-203ENST00000420813 DSCR3O14972 297 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 NDUFS3O75489 264 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 ITGAXP20702 1163 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 MMP11P24347 488 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 BASP1P80723 227 aaKnown RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 AIMP2Q13155 320 aaKnown RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 PLEKHN1Q494U1 663 aaPredicted RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 OTOAQ7RTW8 1153 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 C2orf73Q8N5S3 287 aaPredicted RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 LMNTD1Q8N9Z9 388 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 MAIP1Q8WWC4 291 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 MRM3Q9HC36 420 aaKnown RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 CUTCQ9NTM9 273 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 IL1RAPL1Q9NZN1 696 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 CIDEBQ9UHD4 219 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 NXT1Q9UKK6 140 aaKnown RBP16.65■□□□□ 0.26
MSH6-203ENST00000420813 KLK4Q9Y5K2 254 aa16.65■□□□□ 0.26
MSH6-203ENST00000420813 FITM1A5D6W6 292 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 SRPX2O60687 465 aaPredicted RBP16.64■□□□□ 0.25
MSH6-203ENST00000420813 C1orf105O95561 183 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 NMBRP28336 390 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 CCNFP41002 786 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 FOXL2P58012 376 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 CRADDP78560 199 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 CDK16Q00536 496 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 NKG7Q16617 165 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 FAM214AQ32MH5 1076 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 TTC29Q8NA56 475 aaPredicted RBP16.64■□□□□ 0.25
MSH6-203ENST00000420813 MAGEC3Q8TD91 643 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 FOPNLQ96NB1 174 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 SPSB2Q99619 263 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 SELENOSQ9BQE4 189 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 KIFC1Q9BW19 673 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 MAP10Q9P2G4 905 aa16.64■□□□□ 0.25
MSH6-203ENST00000420813 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.25
MSH6-203ENST00000420813 DOPEY1Q5JWR5 2465 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 SEMA7AO75326 666 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 TPSB2P20231 275 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 ATP5DP30049 168 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 GRIA3P42263 894 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 EIF3BP55884 814 aaKnown RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 MRPL49Q13405 166 aaKnown RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 NAA25Q14CX7 972 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 TPSAB1Q15661 275 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 TYSND1Q2T9J0 566 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 RNF187Q5TA31 235 aaPredicted RBP16.63■□□□□ 0.25
MSH6-203ENST00000420813 ARMC3Q5W041 872 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 MRNIPQ6NTE8 343 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 ZNF662Q6ZS27 426 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 COX15Q7KZN9 410 aa16.63■□□□□ 0.25
MSH6-203ENST00000420813 GSTA5Q7RTV2 222 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms