RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RAB40ALP0C0E4 278 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 CDH3P22223 829 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 AZGP1P25311 298 aaKnown RBP3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 MAZP56270 477 aaKnown RBP3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 UBXN2AP68543 259 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 TEAD2Q15562 447 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 ODF4Q2M2E3 257 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 ERMARDQ5T6L9 678 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 PRR27Q6MZM9 219 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 MFSD12Q6NUT3 480 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 Q6ZRP5 223 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 OR5AP2Q8NGF4 316 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 MRGPRDQ8TDS7 321 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 SUSD6Q92537 303 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 SECISBP2LQ93073 1101 aaKnown RBP3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 CDK19Q9BWU1 502 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 CPVLQ9H3G5 476 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 Q9H8V8 135 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 FAM207AQ9NSI2 230 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 ANKEF1Q9NU02 776 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 SPHK1Q9NYA1 384 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 MORF4L1Q9UBU8 362 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 TRIM17Q9Y577 477 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 RPS6KL1Q9Y6S9 549 aa3.86□□□□□ -1.79
HMGB1P49-201ENST00000418882 ACSL3O95573 720 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 CD22P20273 847 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 MTHFRP42898 656 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 RAD52P43351 418 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 LEPRP48357 1165 aaKnown RBP3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 PPP5CP53041 499 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 ALCAMQ13740 583 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 LPAL2Q16609 132 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 CFAP58Q5T655 872 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 TMEM207Q6UWW9 146 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 PTAR1Q7Z6K3 402 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 PRPF39Q86UA1 669 aaKnown RBP3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 NUDT13Q86X67 352 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 MARVELD2Q8N4S9 558 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 POGLUT1Q8NBL1 392 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 TSPAN14Q8NG11 270 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLF1Q9BQI6 1058 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 P2RY12Q9H244 342 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 WDR35Q9P2L0 1181 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 DDX25Q9UHL0 483 aaKnown RBP3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLC24A2Q9UI40 661 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 TNNQ9UQP3 1299 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 WDR83OSQ9Y284 106 aa3.85□□□□□ -1.79
HMGB1P49-201ENST00000418882 MYH14Q7Z406 1995 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 TCRBV21S2A2A0A5A6 115 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 TRBC2A0A5B9 178 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 C2orf81A6NN90 581 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 SLCO1B7G3V0H7 640 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 ARHGEF9O43307 516 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 CELF2O95319 508 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 BDNFP23560 247 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 RPL21P46778 160 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 POLR2LP62875 67 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 IRX6P78412 446 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 ITGA7Q13683 1181 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 CTU2Q2VPK5 515 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 C20orf194Q5TEA3 1177 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 GPR139Q6DWJ6 353 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 C11orf63Q6NUN7 778 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 CLEC4GQ6UXB4 293 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 IL17RELQ6ZVW7 336 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 CENPVQ7Z7K6 275 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 ZNF614Q8N883 585 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 KCTD6Q8NC69 237 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 OR10Q1Q8NGQ4 319 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 CENPTQ96BT3 561 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 ZNF689Q96CS4 500 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 C10orf90Q96M02 699 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 MUS81Q96NY9 551 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 SEPHS2Q99611 448 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 FUCA2Q9BTY2 467 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 TLE6Q9H808 572 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 EXOGQ9Y2C4 368 aaKnown RBP3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 WDR37Q9Y2I8 494 aa3.84□□□□□ -1.79
HMGB1P49-201ENST00000418882 EDDM13A0A1B0GTR0 161 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 ANTXRLA6NF34 631 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 UBE2CO00762 179 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 FPGTO14772 594 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 P4HA2O15460 535 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 C22orf31O95567 290 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 RNF224P0DH78 156 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 TYMPP19971 482 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 OPRL1P41146 370 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 LMAN1P49257 510 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 RALGDSQ12967 914 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 VEZF1Q14119 521 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 TNIP1Q15025 636 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 EXT1Q16394 746 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 MCMDC2Q4G0Z9 681 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 UGT3A1Q6NUS8 523 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 RBPMS2Q6ZRY4 209 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms